3D Structure for uvig_594088_CDS_0028 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.00 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_594088_CDS_0028 1 AcrIB9 0.72 View Alignment uvig_594088_CDS_0028 M N N S V E T K K A E V -R -K -N I K -N T -L E S A T K K I -K D I I S V ---C -P -D W E -V E D --V S L --(60)
MN + + + + KI +D D +
AcrIB9 M N K F A F E N ----D -K -Y -L E R -N I -K A V V E K I A R D F N L H L K S K Y S K D C -E F T V V A D N -S F
uvig_594088_CDS_0028 -G -Y K S L S V -C L N L K G -V E R -D R S L V I R Y Q A K A -G -N -F Q E E S F --N T N V A -S C G E F D L L (120)
S + D+ + + Y + + +
AcrIB9 D N I E N S T I F L E I K R N D G K A C Q D H H I Y A E Y E C D E D D N -E Y I A L T V K F Y G S S -A -S N Q I N T V
uvig_594088_CDS_0028 E A N D N L K Y Y -T A I -G -D I L N H ---K ----G M L S L L K -D S ---------------------(180)
+ KY I
AcrIB9 Q G I K S S K Y A S -C I V -S -D T D N Q L S -K S I H E L N L K K E K -E Q Q E A W N K K E A E Y A R K K Q A Y V S
uvig_594088_CDS_0028 --M -A -S -Y T ----N -L -I I -E L R -K E -Y V K L --G Q E D (218)
+ + K G
AcrIB9 Q S Q R -E -K -Y E D I F -D -L P -F D F -Y -D Y I D K K E Q G L -I
uvig_594088_CDS_0028 2 AcrIB2 0.64 View Alignment uvig_594088_CDS_0028 N /A (3)
N/A
AcrIB2 N /A
uvig_594088_CDS_0028 3 AcrIIA5 0.63 View Alignment uvig_594088_CDS_0028 M N N S V E T K ---K -A E --V R K -N -I K N T L E S A T K K I K D I I S V C P D W E V E D -----V S -L -G (60)
M + + + ++ + W +
AcrIIA5 M A Y G K S R Y N S Y R K R S F N R S N K -Q -R R E Y A Q E M D R L E K A F E N L D G W Y L S S M K D S A Y -K -D F
uvig_594088_CDS_0028 Y K S L S V C L N L K G -----V -E R D R S L V I R Y Q A K A G N F Q E E S F N T N V A S C G E F D L L E A N D N L (120)
K N L++ A D+
AcrIIA5 G K Y E I R L S N H S A D N K Y H D L -E N G R L I V N I K A -S K -------------L N F V D I -I E ----
uvig_594088_CDS_0028 K Y Y T A I G D I L N H K -G M L -S L L ---K -D S -M A ---S Y T N L I I E -L R -K -E -Y -V K L G Q -E -(180)
+ + + L + + I
AcrIIA5 ---N K L ---D K I I E K -I D K L D L D K -Y -R F -I N A T N L E H D I K -C Y -Y -K -G -F K T K -K E -V
uvig_594088_CDS_0028 D (181)
AcrIIA5 I
uvig_594088_CDS_0028 4 AcrIE7 0.57 View Alignment uvig_594088_CDS_0028 M N N S V ---E T -K K A -E V R -K N I K N T ----L -E -S A T K K I K D I I S V C P D W E V E D V S L G Y K S (60)
M + + K + + + D V ++
AcrIE7 M I -G S E K Q V N W -A K S -I I E K E -V E A W E A I -G -V -D V R E V A A F L R S I S D A R V I I D --N -R N
uvig_594088_CDS_0028 L S V C L N L K G V E R D R S L V I R Y Q A K --A G N F Q E E S F N T N V A S C G E F D L L E A N D N L -K -Y Y T A (120)
L + S + + L +A
AcrIE7 L I H -F Q S ---S -G I S Y S L ---E -S S ----------P --L -N S -P I F L ------R -R -F S A
uvig_594088_CDS_0028 I G D -I L N H K G M L S L L -K -D S M A S Y T N L I I -E -L R K E Y V -K -L G Q E D (166)
+ + I L ++
AcrIE7 ---C ----S V ----G F -E -E I P T A L Q R I R S -V Y T -A --K -L L -E D E
uvig_594088_CDS_0028 5 AcrIIA11 0.55 View Alignment uvig_594088_CDS_0028 M N -N S V E T K K A E ---V ---R K ----N ---------I -K ----N -T -L -E -S -A -T -K -K I (60)
M ++ + +
AcrIIA11 M A D M T L R Q F C E R Y R K -G D F L A K D R E T Q I E A G W Y D W -F -C D D K -A -L -A -G -R -L -A -K I -
uvig_594088_CDS_0028 K -D I I S -V ----C --------P ----D W E ------V E D V S L ---G -Y K S L S V C L N L K G -V (120)
+ + L + +
AcrIIA11 W G I -L K G I T S D Y I L D N Y R V W F -K N N C P -M V G P L Y D D V R F E P L D E E Q R D E L Y F G V A I D D K -
uvig_594088_CDS_0028 E R D -R S L V I R Y Q A K A G N F Q E E S F N T N V A S C G E F D L L E A N D N L K Y Y T A I G -D I L N H K -G -M (180)
R+ VI +A E +NV F + D LK + +
AcrIIA11 R R E K -K Y V I F -T A -R N D Y E N E C G F N N V R E V R Q F -I N G W E D E L K N -----E E F Y K A R E -K K
uvig_594088_CDS_0028 L S L L K D S -M A S Y T N L I I E L R K E Y V K L G Q E D (210)
+ + + + ED
AcrIIA11 R Q E M E E -A N N K F A E I M Q R A D E I L W N -L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;