3D Structure for uvig_593937_CDS_0035 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 96.12 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_593937_CDS_0035 1 AcrIIA7 0.92 View Alignment uvig_593937_CDS_0035 M D F G D A I K A M K N G S K L Q R E G W N G K N Q Y -I -E L -A M C I S Y K N ---A --------D G -K -M -(60)
M FG A+ K G + R GWNGK I +
AcrIIA7 M T F G Q A L E S L K R G H L V A R K G W N G K G -M F I F M R P E D S L P T N M I V N -Q V K S L P E S F -K -R -W
uvig_593937_CDS_0035 I N A E -----H E -A -I -G N C A I A F V G T S G -V Q L G W L A S Q A D M L A E D W K I V D (110)
+ + + + G + GWLASQ DMLA DW IV+
AcrIIA7 V A N N H G D S E T D R -I -K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
uvig_593937_CDS_0035 2 AcrIE9 0.83 View Alignment uvig_593937_CDS_0035 M D F G D A I K A M K N G S K L Q R E G W N G K N Q Y I E L A M C I S -Y K N A D G K M I N A E H E A I G N C A I A F -(60)
M+ I K G ++ G + A G+
AcrIE9 M E M -Q -I N S R K L G R T I T F S R P -G A S Y I -F -A ---D L -N G -----------K S G T L G C Q -I
uvig_593937_CDS_0035 V -G -T -S G V Q L G W L ---A -S ----Q A -D -M -L A -E D ---W K I V D (104)
G L +
AcrIE9 -C -S -G G G T M G S T L S Y D G D -D Q A Q F E A -I -C -R R W Y R A H V -R G E
uvig_593937_CDS_0035 3 AcrIIA12 0.81 View Alignment uvig_593937_CDS_0035 M D -F ---G -D A I ---K A M K -N -G S K L Q R -E G W -N G K N Q Y I E L A M C I S -Y K N A D G K M I N A E (60)
M D+I K K L N + C + G E
AcrIIA12 M S K T M Y K -N D V I E L I K N A K T -N N E E L L F T S V E R N T R E A A T Q Y F R C P E K H V S D A G V Y Y G -E
uvig_593937_CDS_0035 H E A I G N C A I -A F V G T S G V Q L G W L A S Q A D M L A E D W K I V D (98)
+ + D +
AcrIIA12 D F E F --D G F E I -F E -D D L I Y T R S -Y -------D K E E L N
uvig_593937_CDS_0035 4 AcrIC3 0.80 View Alignment uvig_593937_CDS_0035 M D F G D A I K A M K N ---------G -S -K -L Q R E G W N G K N --Q -Y I E L A M C I S Y K N A D G K M I N (60)
M N + A + D +
AcrIC3 M S I Q V T S T ---N G R T V N L E I E L G -S -V V A S S -G ----Q V -K -F M -A D ---K -T -D R G L E S
uvig_593937_CDS_0035 A E H -E A I G -N C A I A F -V G T S G ----V Q L ----G W L A S Q A -D M L A ----E -D ----W K I -V (120)
+G + + G + + + M K +
AcrIC3 R F L V P E A G N R R I E V A L T G R D L E A A N A L F S E L A A S V E A T N E -M Y R E L D A -E -R A Q I N K -A L
uvig_593937_CDS_0035 -D (122)
AcrIC3 E G
uvig_593937_CDS_0035 5 AcrIIA4 0.80 View Alignment uvig_593937_CDS_0035 M D F G D A I K A M K N -G S K L Q R E G W N G K N Q Y I E L A M C I -S Y K N A D G K M I N A E H E A I G N C A I A F (60)
M D+I+ KN + G N+ L+ + DG + ++
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D -S N S I T Q L I I R V N -N ---D G N E Y V I S E S E N -E S I V E K
uvig_593937_CDS_0035 -V -G -T -S G V Q L G W L A S Q A D M L A E D ----W K -I -V D (96)
+ + K +
AcrIIA4 F -I S A -F K N G W N Q E Y E D E E E F Y N D M Q T I T L K S -E L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;