3D Structure for uvig_593937_CDS_0035 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.12 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_593937_CDS_0035 1 AcrIIA7 0.71 View Alignment uvig_593937_CDS_0035 M D F G D A I K A M K N G S K L Q R E G W N G K N Q Y -I -E L -A M C I S Y K N ---A --------D G -K -M -(60)
M FG A+ K G + R GWNGK I +
AcrIIA7 M T F G Q A L E S L K R G H L V A R K G W N G K G -M F I F M R P E D S L P T N M I V N -Q V K S L P E S F -K -R -W
uvig_593937_CDS_0035 I N A E -----H E -A -I -G N C A I A F V G T S G -V Q L G W L A S Q A D M L A E D W K I V D (110)
+ + + + G + GWLASQ DMLA DW IV+
AcrIIA7 V A N N H G D S E T D R -I -K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
uvig_593937_CDS_0035 2 AcrIIA4 0.56 View Alignment uvig_593937_CDS_0035 M D F G D A I K A M K N -G S K L Q R E G W N G K N Q Y I E L A M C I -S Y K N A D G K M I N A E H E A I G N C A I A F (60)
M D+I+ KN + G N+ L+ + DG + ++
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D -S N S I T Q L I I R V N -N ---D G N E Y V I S E S E N -E S I V E K
uvig_593937_CDS_0035 -V -G -T -S G V Q L G W L A S Q A D M L A E D ----W K -I -V D (96)
+ + K +
AcrIIA4 F -I S A -F K N G W N Q E Y E D E E E F Y N D M Q T I T L K S -E L N
uvig_593937_CDS_0035 3 AcrVIA3 0.52 View Alignment uvig_593937_CDS_0035 M D F G D A I K A M -K N G S K L Q R E G W N G K N -Q Y I E L A M C I S Y K N A D G K M I N A E H E A I G N C A I A F (60)
M + + + G+ E + GK ++
AcrVIA3 M F -K E F L E K C L R Y G N L Y I L E E T G D -R K -K V K R --I S K ---R H G K V T -------E -A S V L L
uvig_593937_CDS_0035 V G T -S -G V Q -L G W L A S --Q A D M L A -E D ---W K I V D (95)
+ + + ++ +
AcrVIA3 F D S G T K R T T I N E I Y L N S Q G Y F I I R D Q K R L K L E K F K
uvig_593937_CDS_0035 4 AcrIF18 0.51 View Alignment uvig_593937_CDS_0035 M D F G D A I K A M K N G S K -L -Q R E G -W N G K N Q Y I E L A M C -I S Y K N A D G K M I N A E -H E A I G N C A (60)
M I K ++ WN + G + +
AcrIF18 M T --T -I ---K A A Y -I -S -K D Q N W N D G ---T ---T -T -Y W F D V N G E T F G V V H -G -G E S W N
uvig_593937_CDS_0035 I A F V G T S G V Q L G W L A S -Q A D M L A -E -D -W -K I V -D (95)
+ V G+ Q + +
AcrIF18 A K V V D C D G A P S D Q Y T V D Q F --N -I -T -E -D -M I A E
uvig_593937_CDS_0035 5 AcrIIA12 0.51 View Alignment uvig_593937_CDS_0035 M D -F ---G -D A I ---K A M K -N -G S K L Q R -E G W -N G K N Q Y I E L A M C I S -Y K N A D G K M I N A E (60)
M D+I K K L N + C + G E
AcrIIA12 M S K T M Y K -N D V I E L I K N A K T -N N E E L L F T S V E R N T R E A A T Q Y F R C P E K H V S D A G V Y Y G -E
uvig_593937_CDS_0035 H E A I G N C A I -A F V G T S G V Q L G W L A S Q A D M L A E D W K I V D (98)
+ + D +
AcrIIA12 D F E F --D G F E I -F E -D D L I Y T R S -Y -------D K E E L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;