3D Structure for uvig_5936_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 91.65 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_5936_CDS_0004 1 AcrIE1 0.73 View Alignment uvig_5936_CDS_0004 M K V E E M Q N S E V E D Y L L E H -L E I G T L F G K L T E T A D E L S K A A T M R A T I M G F N -P T P A E V L K A (60)
M + + L+ L L E A LS ++ + +
AcrIE1 M -E K -K L S D -A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A -------E T L S D Q A N E L
uvig_5936_CDS_0004 E A A L R K N -M A E V I L I C E I L A C N T D A W D D V K D T Q E -E -I -A R -K W V E L M M K E E E K (114)
+R++ E+ +C + W +V + ++ ++
AcrIE1 A N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H -G I -R V Y G D A I D R D -V D
uvig_5936_CDS_0004 2 AcrIE6 0.72 View Alignment uvig_5936_CDS_0004 M K V E E M Q N S E V E D -Y -L -L -E -H L E I G T L -F G K L T E T A D E -L S K A A T M R A T I M G F N P T P A (60)
M + + + T+
AcrIE6 M N -N -D ----T -E V -L -E -Q -Q -------I ----K A F E L -L A D E L K D R L P T L E I L -----
uvig_5936_CDS_0004 E V L K A E A A L R K N M A E V I L I C E I L -A C N T D A W D D V K D T Q E E -I A -R K W V E L M M K E E E -K (118)
M+ LI L ++ + EE + ++L K
AcrIE6 -----S P M Y T A V M V T Y D L I G K Q L A ----S R R A E L I E I L E E Q -Y P G H A A D L S I K -N L C P
uvig_5936_CDS_0004 3 AcrIF15 0.68 View Alignment uvig_5936_CDS_0004 M K V E E -M Q N S E V E D Y L L E H L E I G T L F G K L T E T A D E L S K A A T M R A T I M G F N P T P A E V L K A E (60)
M EV K+ + V
AcrIF15 M T T I -T I A Y -E V ----S --------N D K V E T I K T M V E -S ----Q ------Q I -H N V N F --
uvig_5936_CDS_0004 A A L R K N M A E V I L I -C E I L A -C N T D A W -D D V -K D T Q E E I A R K W V E L M M K E E E K (112)
E + + D ++ K ++
AcrIF15 -N ----G E E F T I -E R G D F -T S ---I -D K D -E -A E H V K L L N K I Q D I I H -G -Y S
uvig_5936_CDS_0004 4 AcrIIA34 0.68 View Alignment uvig_5936_CDS_0004 M K -V E E M Q N S E V E D Y L L E H L E I G T L F G K L T E T A D E L S K A A T M R A T I -M G F N P T P A E V L K A (60)
MK + + + + +
AcrIIA34 M K N I A N E ----I K T I R Y ---A F E D G R S T Q K S I M R K I K A L T D Q F -E T M ---D D L I D S L N S Y
uvig_5936_CDS_0004 E A -A -L R K N M A E V I L I C E I -L -A C N ---T -D A -------W ------------D -D V -K -D (120)
+ + A + +
AcrIIA34 A -D -T -H Y T W A I T Y F Q L A R I -I I S F Q A S N N T T S E K K I D L Q S G P I E V N G K L K I R V -T V -D -
uvig_5936_CDS_0004 -T Q E E I A R ------K -W -V -E -L -M M K E E E K (151)
+ KE
AcrIIA34 E -F M A D L A N W E H L E -D -I -K -K -L -A K E L -A
uvig_5936_CDS_0004 5 AcrIC3 0.66 View Alignment uvig_5936_CDS_0004 M K V E E M Q -N S E V E D Y -L L E H L E I G T ------L F G -K L T -E -T -A D E L S K A -A T -M -R A T I (60)
M + + ++ +E+G+ D
AcrIC3 M S I -Q V T S T N -G -R T V -N L E I E L G S V V A S S G Q V K F -M A D -K -T -D R G L E S R F -L -V P -E -
uvig_5936_CDS_0004 -M G F N -P T P A E V L -K A E A A L R K N M A E V I L I C E I L A C N T D A W D D V K D T Q E E I A R K W V E L M M (120)
G V + + ++ ++ + + + E+ + +
AcrIC3 A -G N R R I -E --V -A ----L T G R ---D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K
uvig_5936_CDS_0004 K E E E K (125)
E
AcrIC3 A L -E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;