3D Structure for uvig_592000_CDS_0052 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.32 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_592000_CDS_0052 1 AcrIE6 0.70 View Alignment uvig_592000_CDS_0052 M -T D K D L L K D L N E -R I T ----L Q Q D L I N R Y T N A ---N T F ----A P D F Y Y E E L Y Q M C A E R D (60)
M +D ++L D + D L + AE
AcrIE6 M N N D T E V L E Q Q I K A F E -L L A D E L K D R L P T L E I -L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I
uvig_592000_CDS_0052 -K L ---M -H K -M ----Q --Q --R (83)
L +
AcrIE6 E I L E E Q Y P G -H A A D L S -I K N L C P
uvig_592000_CDS_0052 2 AcrIIC4 0.59 View Alignment uvig_592000_CDS_0052 M -T D K D L L -K --------D --------------L N E R I T ----L Q Q D L I N ---R Y T -N -A (60)
M L + D +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y -S K -E -
uvig_592000_CDS_0052 -N -T F A P D -F Y -Y E -E -L -Y Q M C -A E R D -K L M H K M Q -Q R (99)
K Q
AcrIIC4 L -A E K F N K E -A V N -E -A -V E K -L Q -K A I D L -A E K Q G I Q F
uvig_592000_CDS_0052 3 AcrIF23 0.56 View Alignment uvig_592000_CDS_0052 M -T D K D L L K D -------L N -E R I T ------------------------------------(60)
M + L I
AcrIF23 M T N F Q T W L D S A D I P V Q Q N -G Q W I -D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
uvig_592000_CDS_0052 ----------------------------L Q Q --------------D -L I N -R Y T N A N T F - (120)
Q I N +
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I -E N R -N D S A Q E
uvig_592000_CDS_0052 ------A P D F Y Y E --------E L Y Q -M C A E -R -D -K -L -M H -K M Q -Q --R (170)
A +
AcrIF23 I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V A K I -A -A -E -Y -N A -L T A R W G F
uvig_592000_CDS_0052 4 AcrIE1 0.56 View Alignment uvig_592000_CDS_0052 M --T ---D K D L L K ----D -------------L -N E -R I T --------L Q Q D L -I N -R Y T N (60)
M +L + + Q
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L -S L I V -F Q A E T L S D -Q A N E L -A N Y I R R
uvig_592000_CDS_0052 A N T F -------A P D F Y Y E E L Y Q M C A ----E -R -D -K L M H K M Q -Q --R (107)
D C ++
AcrIE1 Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H -G -I R V Y G D A I D R D V D
uvig_592000_CDS_0052 5 AcrIIA28 0.56 View Alignment uvig_592000_CDS_0052 M -T ------D K D L L K D --------L N E R I T ----L Q Q -D L I ------N -R Y T -N -A -N -T (60)
M T +LL D L + +Y
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K E L F N S M H D F R S Q H -A K E A R I P G W S -D K Y -N -K -L -E -
uvig_592000_CDS_0052 -F --------A P D F Y Y E E L Y Q M C -A E R D K L M H K M Q Q -R (98)
+ Y+ L + D L K
AcrIIA28 K -K M L S D F E E V T G I K Y D T L E S E -L -I W D N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;