3D Structure for uvig_589201_CDS_0086 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.51 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_589201_CDS_0086 1 AcrIE6 0.74 View Alignment uvig_589201_CDS_0086 M I I Q L N D I M K -A -D I I -Q L E -D -Y D M Q L A F E I E T V E -R -Q L Q Y A D K K N D R V W H E K A L K A R (60)
M + Q+ ++ + L + +
AcrIE6 M N -N D ---T -E -V L E -Q Q I -K -A ----F E L L A D E L K D -R -L P T L -E I L -S P M Y T A V M V T Y
uvig_589201_CDS_0086 D H M R R T R A L I K T R L D K L Y F G E E R -M I H G A I L A Q I R K E M P I G K F M S Y V H R A K Q E A G -L (117)
+ +R L E
AcrIE6 ---D L I G K Q L A S R R A E L I E I L E -E Q --------Y P G H A A D L --------S I K N -L C P
uvig_589201_CDS_0086 2 AcrIE1 0.61 View Alignment uvig_589201_CDS_0086 M I I Q L ---N D I -M K A ----------D ----I -I -Q -L -E -D -Y D M Q L A -F E I E T V E R Q L Q (60)
M L + A Q+ +++ ++
AcrIE1 M E K K L S D A Q V -A L V A A W R K Y P D L R E S L E E A -A -S -I -L -S -L I V F Q A -E T L S D Q A N E L A N
uvig_589201_CDS_0086 Y A D K K N D R V W H E K A L K A R D H M R R T R A L I K T R L D K L Y F G E E R M I H G A I L A Q I R -K E M P I G K (120)
Y+ + E A A RA +
AcrIE1 Y I R R Q G L ----E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I --------R V Y G D -------
uvig_589201_CDS_0086 F M S Y V H R A -K Q E A G L (135)
AcrIE1 ------A -I D -R D V D
uvig_589201_CDS_0086 3 AcrIIC4 0.57 View Alignment uvig_589201_CDS_0086 M I I Q L N D I M K A D I I Q L E D Y D M Q L A F -E I E T V E R Q L Q Y A D K K N D R V W H E K A -L -K -A -R -D (60)
M I+ + I+ + K +
AcrIIC4 M K I T -S S N F A T -I A ---------T S E N F A K L S V ---L -P K ----N ---H -R -E -P -I -K G
uvig_589201_CDS_0086 H -M R -R -T -R A L I K T -R L D K L Y F G E E R M I H G A I L A Q I R K E -M ----P I -G -K -F -M S Y V H (120)
+ + E ++ K +
AcrIIC4 -L F -K -S -A V E -Q F S S -A R D F F K N E N -Y -S K E L A E K F N K -E -A V N E A -V -E -K -L Q K A I -
uvig_589201_CDS_0086 -R A K Q E A G -L (130)
A
AcrIIC4 D L A E K Q G I Q F
uvig_589201_CDS_0086 4 AcrIF23 0.57 View Alignment uvig_589201_CDS_0086 M I I Q L N D ------I -M K --A ----------------------------------------(60)
M I
AcrIF23 M T N F Q -T W L D S A D I P V Q Q N -G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
uvig_589201_CDS_0086 -------D I -I Q L E D Y D M Q L A -F E I E T V E R Q L Q Y A D K K N D R V W H E K A L K A -R D H M R R T R A (120)
+ + + +
AcrIF23 F G G R A L T G T A -R Q K E W A E K I R A E K V Q Q M N Q D Q A E M -A ----C D -------P ----S G L L T
uvig_589201_CDS_0086 L I K T R L D K L Y F G E E R M I H G A I L A Q I R K E ----------M P I G -K F M S Y V H R A K Q -E -A --(180)
++K ++ + Q + + K + +
AcrIF23 A A K F W I E N R N D S A Q -E -I A G F V M Q Q K A L L A Q H R S A K A A G Q A -D K V A K I A A E Y -N A -L T A R
uvig_589201_CDS_0086 -G L (183)
G
AcrIF23 W G F
uvig_589201_CDS_0086 5 AcrIF3 0.55 View Alignment uvig_589201_CDS_0086 M I -I Q L N D I M K ----A ----------------D I I Q L E D Y D -M Q L A F E I E T V E -R Q -L Q Y (60)
M I + +A E + + LQ
AcrIF3 M S S T I S D R I I S R S V I -E A A R F I Q S W E D A D P D N L T E S Q V L A A S S F A A R L H E G L Q A -T V L Q R
uvig_589201_CDS_0086 A D K K N D R V W H E K A L K A R D H M R R T R A L I K T R L D K L Y F ---G E ---E -R M I H G A I L A Q I R K E (120)
+ + ++ + ++ + I + LA++
AcrIF3 L V D E S ---N ----R D E Y R E F Q A W E E A L L N A D G R V T S N P F A D W G W -W Y R I A N V M L A T A S Q N
uvig_589201_CDS_0086 ---M ----P I G K F M S Y V H R A K Q E -A --G -L (150)
G+ M Q
AcrIF3 V G V A W G S H V H G R L M A I F Q D R F Q Q H Y E D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;