3D Structure for uvig_588861_CDS_0024 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.80 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_588861_CDS_0024 1 AcrIC5 0.72 View Alignment uvig_588861_CDS_0024 M -Y V T Y N N T Q V D F E A A V N L M D D E I R E A L H M E M A P C T E Q E F F D A Y C E A H E E K Y G -E E F -A I (60)
M VT N +Q+DF+AAVNLMD E+RE LH ++QEF DAY AH K EEF ++
AcrIC5 M S K V T L N G Q Q I D F D A A V N L M D A E L R E E L H S A Q E W T N D Q E F L D A Y V Q A H A A K F D G E E F Q V A
uvig_588861_CDS_0024 2 AcrIE3 0.60 View Alignment uvig_588861_CDS_0024 M Y V T Y N N T Q V D F E A A V ----N L M D D E I -R E A L H M E M -----A P -C ---T E Q E F F D A Y C -E (60)
M +T +T+ + + D I L + D
AcrIE3 M K I T N D T T T Y E V A E L M G S E A D E L D G R I M M -G L L S R E C V V D T D -D L S E D Q W L A L I D E S -Q -
uvig_588861_CDS_0024 -A H E E K -Y -G E E F A I (75)
++ E E +
AcrIE3 K V R R E -Q -F -E S D E A
uvig_588861_CDS_0024 3 AcrIE8 0.58 View Alignment uvig_588861_CDS_0024 M Y V -T Y N N T Q V D F E A A V N L M D D E I R E A L H M E M A P C T E Q -E F F D -A Y C E -------A -H E E (60)
M T N T D EA N +E++E +Y + E
AcrIE8 M T T I T I N -T Y -D P E A R F N M S G E E A K E -F F A F V E E Q -A K V S G -F D V Y Y D S C T Y V D E -E S E R
uvig_588861_CDS_0024 K Y G E E -F A -I (70)
E F
AcrIE8 F V -E K C F Q N Y
uvig_588861_CDS_0024 4 AcrIE4 0.58 View Alignment uvig_588861_CDS_0024 M Y V T Y N N T Q V D F E A A V N L M D D E I R E A L H M E M ---A P C T E Q E F F D ----A -Y -C -E -A H E E (60)
M T + E ++ ++ R + M A TE EF E
AcrIE4 M S -T -Q ---Y T Y E Q I A ----E D F R -L W G E Y M D P N A E M T E E E F Q A L S T E -E -K -V -A M Q V E
uvig_588861_CDS_0024 K Y G E E F -A -I (70)
G +
AcrIE4 A F G ---A -E A
uvig_588861_CDS_0024 5 AcrIIA33_Seq 0.56 View Alignment uvig_588861_CDS_0024 M Y V T Y N N T Q ------V -D F E ------A A V N -L -------M D D E I R E A L H M E -M -------(60)
M ++ + D E + L D +R +
AcrIIA33_Seq M E L N F V G Q F D N G H D F -Y D V E K F V D V N V E T G R L S D E D I I K V Y D A L R N E H R L R R G K G K Y G N L
uvig_588861_CDS_0024 ---A P -C T E Q E F F D ----A Y C E -A -H E E K Y G E E F -A I (97)
A + + E + +
AcrIIA33_Seq L S F A -E Y G D E D V L T D T T Y -W Y E E -D I L P A Q -D R L E E L
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;