3D Structure for uvig_588620_CDS_0028 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.17 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_588620_CDS_0028 1 AcrIE6 0.71 View Alignment uvig_588620_CDS_0028 M F G K K K K P F N P -Y E N -R A D D L L Y E V W E E R D R V -Y E K T T Q V -I -T -R -L -G V I D L -Y P -E -(60)
M L +
AcrIE6 M -N ---N ----D -T E V ----L E Q Q ----I K A F E -L L A D E L K -D -R -L -P -T ---L -E I -L
uvig_588620_CDS_0028 G A D R K K A V S D A E K A K Q S L L V A I G A Y D T A R -M -E -Y -N -D -Y -V -K -K -N A E K F D S P K K E W (120)
+ + ++ + E
AcrIE6 -------S P M Y T A V M V T Y D L I G K Q ---L -A -S -R -R -A -E -L -I -E -I L E E Q Y P G H A A --
uvig_588620_CDS_0028 T T T S H E I V E W A Y R F Y N -K -E (140)
+
AcrIE6 D -L ------S -I K N --L -C P
uvig_588620_CDS_0028 2 AcrIE1 0.66 View Alignment uvig_588620_CDS_0028 M F G K K K K P F N P Y E N -R A D -D -L L Y E V W E E R D R V Y E K T T Q -V I T R L G V I D L Y P E G A D R K K A (60)
M K + + R
AcrIE1 M -E --K -K ---L S -D A Q -V -A ----L V A A W R K -------Y -P D L ------------R E S -
uvig_588620_CDS_0028 -V S D A E K A K Q S L L V A I G A Y D T A R M E Y N D Y V K K -N A E K F ----D ----S -P K K E W T T T S H E (120)
+A + + ++ + E Y+++ +E + W E
AcrIE1 L -E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q G L E E A E G A C -R N I D -I M R A K W V E V C G E
uvig_588620_CDS_0028 I V E W ----A -Y R F Y N -K -E (139)
+ +
AcrIE1 V N Q H G I R V -Y G D A I D R D V D
uvig_588620_CDS_0028 3 AcrIF23 0.61 View Alignment uvig_588620_CDS_0028 M F G K -K K K ------------P F ---------N P ---Y --------E ----N ---------(60)
M P Y
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W -I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_588620_CDS_0028 --R -A D D L L -Y E V -W E E -R D R V Y E K T T Q V I T R L G V I D L Y P E G A D R K -K A -V S D -A E K -A K (120)
R + EK +Q + S
AcrIF23 G G R A L T G T -A R Q -K E W -A E K I R A E K V Q Q M N Q D Q A E M A ---------C D -P -S G L -L T A -A
uvig_588620_CDS_0028 Q S L L V A I G A Y D T A R M E Y N D Y V K K N A E K F D S P -K K E W T T T S H E I V E W A Y R F Y N K --E (176)
+ + K + S I+ +
AcrIF23 K F W I E N R N D S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
uvig_588620_CDS_0028 4 AcrIIC4 0.60 View Alignment uvig_588620_CDS_0028 M F G K K K K P F N -P Y E N R A D -D L L Y E V -W E E R D R V Y E K T T Q V I T R L G V I D L Y P E G A D R K K -A (60)
M + + + +
AcrIIC4 M -K --I T -S S N -F A ----T ----I -A -T -S E N -----------F A K L S V ---------L -
uvig_588620_CDS_0028 -V -S -D -A -E K -A K Q S L L V A I G A Y D T A R M E Y N -D Y V K --K N A E K F -D S P K K ----E W T T T (120)
E +K A+ + K + K E
AcrIIC4 P -K -N -H -R E -P I K G L F K S A V E Q F S S ----A R D -F F K N E N Y S K E L A E K F N K E A V N E A V E K
uvig_588620_CDS_0028 S H E I V E W -A Y R F Y N K E (136)
+++ A +
AcrIIC4 L Q K A I D -L A E K Q G I Q F
uvig_588620_CDS_0028 5 AcrVA1 0.54 View Alignment uvig_588620_CDS_0028 M F G K K -K K -P -----F -N P ---Y E N R A D D L L Y E V W E E R D R V Y E K T T Q V ---I T -R L -G V I (60)
M K + + D+L + R + ++ + G
AcrVA1 M Y E A K E R -Y A K K K M Q E N T K I D T L T D E Q H D A L A Q L C A F R H K F H S N K D S L F L S E S A -F S G E -
uvig_588620_CDS_0028 D L Y P E -G A D R K -K A V S D A E K A K Q -S ---L -L V A I G A Y D ---T ------A R -M ----E Y N -(120)
+ K+ S + + + E
AcrVA1 F S F E M Q S D E N -S K L R E V G L P T I E W S F Y D N S H I P D D S F R E W F N F A N Y S E L -S -E T I Q E Q G L
uvig_588620_CDS_0028 D -Y -V K K -N -A -E -K ----F -----D -S -P ----K K E W T T T S H E I V E W A Y R F Y -------(180)
E ++ + +
AcrVA1 -E -L D L -D -D -D -E T Y E L V -Y D E L Y -T -E -A M G E Y E E L N Q D I E K Y L R R I D E E H G T Q Y C P T
uvig_588620_CDS_0028 --N -K E (186)
AcrVA1 G F A R L R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;