3D Structure for uvig_588620_CDS_0028 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 92.17 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_588620_CDS_0028 1 AcrIE1 0.67 View Alignment uvig_588620_CDS_0028 M F G K K K K P F N P Y E N -R A D -D -L L Y E V W E E R D R V Y E K T T Q -V I T R L G V I D L Y P E G A D R K K A (60)
M K + + R
AcrIE1 M -E --K -K ---L S -D A Q -V -A ----L V A A W R K -------Y -P D L ------------R E S -
uvig_588620_CDS_0028 -V S D A E K A K Q S L L V A I G A Y D T A R M E Y N D Y V K K -N A E K F ----D ----S -P K K E W T T T S H E (120)
+A + + ++ + E Y+++ +E + W E
AcrIE1 L -E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q G L E E A E G A C -R N I D -I M R A K W V E V C G E
uvig_588620_CDS_0028 I V E W ----A -Y R F Y N -K -E (139)
+ +
AcrIE1 V N Q H G I R V -Y G D A I D R D V D
uvig_588620_CDS_0028 2 AcrIIA28 0.66 View Alignment uvig_588620_CDS_0028 M F G K K K K P F -N P Y E N R A D D -L L -Y E V W E E R D R V Y E K T T -Q V I T R L G V I D L Y P E G A D R K K A (60)
M ++ L E + +
AcrIIA28 M -K --T I F T K K Q ----T E E L -L N D I S I E K Q K E L F N S M H D F R S Q -H A K E A ---R --I P ---
uvig_588620_CDS_0028 V S D A E K -A K Q S L L V A I -G -A Y D -T -A R M -E Y N D Y V K K N A E K F D S P K K E W T T T S H E -I V E -(120)
+ K D+ +
AcrIIA28 ------G W S D K Y N K L E K -K -M L S -D -F E E V T -G ---I ---K Y D T L E S --E L ----I -W D N
uvig_588620_CDS_0028 W -A -Y R F Y N K E (131)
+F
AcrIIA28 -L -S N K F L Y N S
uvig_588620_CDS_0028 3 AcrIIA19 0.66 View Alignment uvig_588620_CDS_0028 M F G K K K K P F ----N P Y E N R A D D L L Y E V -W E E -R D R -V Y E K T T Q V -I T R L G V I D L Y P E G A D (60)
M + V +
AcrIIA19 M -K -L --I -V E V E E T N Y K N L V N Y T K L T N E -S H N I -L V N R L I S E Y I T ----K P Y E L R -L D L
uvig_588620_CDS_0028 R K -K A V -S D A E K A K Q S L L V A I G A Y D -T A R M E Y N ---D Y V K K N -A E K F D S ----P K K E W T T (120)
D+ K L+ E + + E F+ E +
AcrIIA19 S E R -Y S N R D L I E F K F M L I E Y C K E A L Q -D I K E L A N S D E A Y E -T D -E A F E A V F R Q L F E E V I S
uvig_588620_CDS_0028 ----T -S -H -E -I V E W A Y R F Y N -K E (145)
F
AcrIIA19 N P D T -V -L -K -A -F H S Y T S F L E E N K
uvig_588620_CDS_0028 4 AcrIF12 0.65 View Alignment uvig_588620_CDS_0028 M F G K K K K P F N P ---Y E N R A D D L L Y E V ---W E E R D R V Y E K T T Q V I T R L G V I D L Y -P E G A D R (60)
M K RA+ E + E + V V +
AcrIF12 M A Y E K T W H R D Y A A E S L K R A E T S R W T Q D A N L E W T Q L A L E C A Q V V H L A R Q V G E E -L -G ---N
uvig_588620_CDS_0028 K K A V -S -D -A -E -K A -K Q S -L L V A I G A Y D T -----------A R M E -Y N D Y V K K N A E K F D S (120)
+ + L + + +E+F S
AcrIF12 ----E -K -I -I -G -I A D T -V L S T I E A H S Q A T Y R R P C Y K R I T T -A Q T -H L L A V T L L E R F G S
uvig_588620_CDS_0028 P K K E W T T T S H E I V E W A Y R F Y N K E (143)
+ + + + K
AcrIF12 A -R R V A N A V W Q L T D D E I D Q A -K A
uvig_588620_CDS_0028 5 AcrIE6 0.65 View Alignment uvig_588620_CDS_0028 M F G K K K K P F N P -Y E N -R A D D L L Y E V W E E R D R V -Y E K T T Q V -I -T -R -L -G V I D L -Y P -E -(60)
M L +
AcrIE6 M -N ---N ----D -T E V ----L E Q Q ----I K A F E -L L A D E L K -D -R -L -P -T ---L -E I -L
uvig_588620_CDS_0028 G A D R K K A V S D A E K A K Q S L L V A I G A Y D T A R -M -E -Y -N -D -Y -V -K -K -N A E K F D S P K K E W (120)
+ + ++ + E
AcrIE6 -------S P M Y T A V M V T Y D L I G K Q ---L -A -S -R -R -A -E -L -I -E -I L E E Q Y P G H A A --
uvig_588620_CDS_0028 T T T S H E I V E W A Y R F Y N -K -E (140)
+
AcrIE6 D -L ------S -I K N --L -C P
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;