3D Structure for uvig_588397_CDS_0016 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.25 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_588397_CDS_0016 1 AcrIE6 0.74 View Alignment uvig_588397_CDS_0016 M Q I N L S S E S V E V I M N S L R D S K R N L N Q Q I D K W D K I N ------E -P S R A E I C R S Q L K E V S D V (60)
M+ N +E +E L + + ++ ++ QL
AcrIE6 M N -N -D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V -M -V T Y D L I G K Q L A S R R A E
uvig_588397_CDS_0016 L L -I F E ----E E L ----Y --A -R (83)
L+ I E + +
AcrIE6 L I E I L E E Q Y P G H A A D L S I K N L C P
uvig_588397_CDS_0016 2 AcrIIC4 0.62 View Alignment uvig_588397_CDS_0016 M Q -I N L -S S E ----------------S -V -E -V -I -M -N -S L R D S K R N L N -Q Q I D -----(60)
M + + + + + D
AcrIIC4 M K I T S S N -F A T I A T S E N F A K L S V L P K N H -R -E -P -I -K -G L F K S A V E Q F -S S A R D F F K N E
uvig_588397_CDS_0016 -K W D K I N E -P S R A -E -I C -R S Q L K E V S D V L L I F E E E L -Y A R (101)
K + ++ ++ + E
AcrIIC4 N Y -S K E L A E -K F N K -E -A V N E A V E K L Q K A I D L A E K -Q G I Q F
uvig_588397_CDS_0016 3 AcrIE1 0.61 View Alignment uvig_588397_CDS_0016 M -Q -I N L ---S S E -----------S V E ----V ----I M -N -S -L R -D -S K R -N L N Q -Q I D (60)
M ++ S+ I + ++ +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L -E E A A S I L S L I -V -F -Q A -E -T L S -D Q A -N E L -A
uvig_588397_CDS_0016 -K W D -K I N E P S R A E I C R S Q L K E V S D V L L I F E E ----E -L -------Y -A --R (112)
+ + AE ++ +
AcrIE1 N Y -I R R -Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R V Y G D A I D R D V D
uvig_588397_CDS_0016 4 AcrIC3 0.56 View Alignment uvig_588397_CDS_0016 M Q -I N L --S S E -S V E ------------V I M N -------S L R D ------------------(60)
M+ ++ ++ +
AcrIC3 M S I -Q V T S T N G R T --V N L E I E L G S V V A S S -G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V
uvig_588397_CDS_0016 --S K R -N L N -Q -Q I D K W D K I N E P -S R -A E I C R S Q L K E V S D V L L I F E E E L Y A R (112)
+ L E+ +E+ + L
AcrIC3 A L T G -R D L -E -A A N -A L F S E L A -A -S V -E A T N E M Y R E L D A E R A Q I N K A L E -G
uvig_588397_CDS_0016 5 AcrIF23 0.55 View Alignment uvig_588397_CDS_0016 M -Q I N -L --S S E -S V E --------------------------------------------(60)
M + + S + V
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_588397_CDS_0016 -----------V I M -N S L R -D ---------------S K R N L N Q Q I D K W D K I N --E P ---- (120)
+R L + + W
AcrIF23 G R A L T G T A R Q K E W A E -K I R A -E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I A
uvig_588397_CDS_0016 ---S R A E I C R S --------Q L K E -V -S -D -V -L -L -I -F -E -E -E L Y -A --R (172)
+ +
AcrIF23 G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V -A -K -I -A -A -E -Y -N -A L -T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;