3D Structure for uvig_586511_CDS_0063 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.20 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_586511_CDS_0063 1 AcrIIA7 0.77 View Alignment uvig_586511_CDS_0063 M T F S D A L N M L K Q G K R L A R Q G W N G K N Q Y I E L A I N I S Y E A -------P -----D -G -E -I --(60)
MTF AL LK G+ +AR GWNGK +
AcrIIA7 M T F G Q A L E S L K R G H L V A R K G W N G K -G M F I F M R P E -D S L P T N M I V N -Q V K S L -P -E -S F K R
uvig_586511_CDS_0063 -V N -T E H K -D M ----G -N -K T I A F V G T S G V Q -L G W L A S Q A D M L A E D W F V L E (111)
V + H + G GWLASQ DMLA DW ++E
AcrIIA7 W V -A N N H G D S E T D R I K F -T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
uvig_586511_CDS_0063 2 AcrIIA4 0.58 View Alignment uvig_586511_CDS_0063 M T F S D A L N M L K Q -G K R L A R Q G W -N -G -K N Q Y I E L A I N I --S -Y E A P D G E I V N T E -H K D M G (60)
M+ +D++ +K+ + +G + L+ DG
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D S N -S ---I T Q L I -I R V N -N ----D G N E Y V I S E -S -E N
uvig_586511_CDS_0063 N K T I A F V G T ---S G V Q L G W L A S Q A D M L A E D ----W F V -L E (100)
+ + + L
AcrIIA4 E S I V E K F I -S A F K N G W N Q E Y E D E E E F Y N D M Q T I T L K S E L N
uvig_586511_CDS_0063 3 AcrIF18 0.53 View Alignment uvig_586511_CDS_0063 M T F S D A L N M L K Q G K R -L A R Q G W -N -G K N Q Y I E L A I N -I S Y E A P D G E I V N T E H K D M G N K T -(60)
MT + K + N G + GE H G
AcrIF18 M T T --I ----K A A Y -I -S K D Q N W N D G -T ------T -T -Y W F D V N G E T F G V V H G --G E S W N
uvig_586511_CDS_0063 I -A F V G T S G V Q L G W L A S -Q A D M L A E -D -W -F V L -E (95)
V G+ Q + + E
AcrIF18 -A K V V D C D G A P S D Q Y T V D Q F --N I -T -E -D -M I A E
uvig_586511_CDS_0063 4 AcrIIA12 0.51 View Alignment uvig_586511_CDS_0063 M T ---F -S -D A L ---N M L K -Q -G K R L A R -Q G -W -N G --K -N Q Y I E L A I N I S Y E A P D G E I V (60)
M+ D++ +K L+ + N +QY G
AcrIIA12 M S K T M Y K -N D V I E L I K N A K T -N N E E L L F T S -V E R N T R E A A T Q Y F R C P -E K -H V S D A G V Y Y
uvig_586511_CDS_0063 N T E H K D M G N -K T I A F V G T S G V Q L G W L A S Q A -D M L A E D W F V L E (102)
E + + L
AcrIIA12 G -E D F --E -F D G F E I -F E D D L I Y T R S ----Y ----D -K E E L N
uvig_586511_CDS_0063 5 AcrVIA3 0.51 View Alignment uvig_586511_CDS_0063 M T F S D A L N M L -K Q -G K R -L A R Q G W N G K N Q -Y I E L A I N I S Y E A -P D G E I V N T E H K --D M -G (60)
M + L + G + + + G + D
AcrVIA3 M F -K E F L E K C L R -Y G N -L Y I L E E T G D -R K K -V K R I S K -----R -H G K V T E A S V L L F D S G T
uvig_586511_CDS_0063 -N -K T I A F -V G T S G V Q L G W L A S Q A D M L A E D W -F V L E (96)
+ ++G + + L
AcrVIA3 K R T T I N E I Y L N S Q G Y F I I R D -Q -K -R L --K L E -K F K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;