3D Structure for uvig_585938_CDS_0014 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.05 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_585938_CDS_0014 1 AcrIE1 0.72 View Alignment uvig_585938_CDS_0014 M N ---E L E R T A L -----------------N -E ----I L R ----T -V -T Y I A E K L ------(60)
M AL I+ A L
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S -I L S L I V F Q A E T -L -S D -Q A N E L A N Y I R R
uvig_585938_CDS_0014 ----------------D -E -L -D -T -K -I -S -L ----N ----D S -Q V -L E H Q -E S (115)
+ +
AcrIE1 Q G L E E A E G A C R N I D I M R A -K -W -V -E -V -C -G -E V N Q H G I R V Y G D -A I D -R -D V D
uvig_585938_CDS_0014 2 AcrIC3 0.63 View Alignment uvig_585938_CDS_0014 M N -E L -E ---R T -A L ---------------------------------------------(60)
M+
AcrIC3 M S I -Q V T S T N G -R T -V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V A
uvig_585938_CDS_0014 ---------N E I L R T V T Y I A E K L D E L D T K I S L N D S Q V L E H Q E S (103)
N + + +E E + + Q+ E
AcrIC3 L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
uvig_585938_CDS_0014 3 AcrIE6 0.62 View Alignment uvig_585938_CDS_0014 M N E L E ----R -T -A L -N E I L R T V ----------------------------T -Y -I -A E K (60)
MN + A +
AcrIE6 M N -N D T E V L -E -Q Q -I K A F E L L -A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K -Q -L A S R
uvig_585938_CDS_0014 L D E L D T K I S L N D S Q V -L E H --Q ---E S (87)
EL + + +
AcrIE6 R A E L I E I L E E Q Y P G H A A -D L S I K N L C P
uvig_585938_CDS_0014 4 AcrIF23 0.59 View Alignment uvig_585938_CDS_0014 M N E L ---E R T -A L -----------------------------------------------(60)
M+ A
AcrIF23 M T -N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_585938_CDS_0014 ---------------N E I L R T V -T Y I A E K L -D E L D -T K I -S ------------------- (120)
I + E
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D -Q A E M -A C D -P -S G L L T A A K F W I E N R N D S A Q
uvig_585938_CDS_0014 ----------L ---------------N D S -----Q V L E H Q ---E -S (166)
+ +
AcrIF23 E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V -A K I A A E Y N A L T A R W -G F
uvig_585938_CDS_0014 5 AcrIIA19 0.56 View Alignment uvig_585938_CDS_0014 M N E L ----E -R T -A L --------------N E I -L R -T V -T Y I A E K L D E L D T K I -------(60)
M L N + + + K EL +
AcrIIA19 M K -L I V E V -E E -T N Y K N L V N Y T K L T N E S H N I L V N -R L -I S E Y I T K P Y E L R L D L S E R Y S N R
uvig_585938_CDS_0014 -----S -------------------------------L -----------N D ----S ---Q (120)
+ N +
AcrIIA19 D L I E F K F M L I E Y C K E A L Q D I K E L A N S D E A Y E T D E A F E A V F R Q L F E E V I S N P D T V L K A F H S
uvig_585938_CDS_0014 V L E H -Q E -S (129)
E
AcrIIA19 Y T S F L E E N K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;