3D Structure for uvig_583537_CDS_0037 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.81 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_583537_CDS_0037 1 AcrIIC4 0.61 View Alignment uvig_583537_CDS_0037 M K E L K T L Y K I I Y D D L K D S D M -L I G Y A K E L K -K T N K -S L A D M Y M T D A K N R L A H S Q I M H -K E (60)
MK + + S L +K
AcrIIC4 M K I T S S N F A ---T I A T -S -E N ----F A K L -S V L P -K ----N H R E P I K G L F K S ---A -V E Q
uvig_583537_CDS_0037 F M S L I D K M I G E N K ----S S E M A D C L W E E I S N H Y M E W Y E S L E N -C I K K W (108)
F S+ D EN + E+ + + +E +
AcrIIC4 F S S A R D F F K N E N Y S K E L A E K F N K E A V N E A V E K L Q K A I D L A E -K Q G I Q F
uvig_583537_CDS_0037 2 AcrIE6 0.57 View Alignment uvig_583537_CDS_0037 M K E L K -T -L Y K I I Y D D L K D S D M L I G Y A K E L K K T N K S L A D M Y M T D A K N R L A H S -Q I -M -H -(60)
M L +K + L+ +K+ T L T +
AcrIE6 M N N D T E -V L E Q Q ----I K A F E L L A D E L K D R L P T L E I L -S P M Y T A V M V T Y D L I G -K Q -L -A
uvig_583537_CDS_0037 K E F -M -S L -I D K M I G E N K S S E -M A D C L W E E I S N -H Y M E W Y E S -L E -N -C I K K W (113)
+ E+ +
AcrIE6 -S R R -A -E L -I E I L E E Q Y P -G H --------A A D L --------S -I K -N L -C -P
uvig_583537_CDS_0037 3 AcrIE1 0.57 View Alignment uvig_583537_CDS_0037 M -K E L K T L Y K I I Y D D L K D S D M L -I -G -Y A -K E L K K T N K S L A D M Y M T D A K N R L A H S Q I M H K (60)
M K L + A + + ++ + + +
AcrIE1 M E K K L S ---D A Q V -------A -L -V -A -A W R K -Y P D L R E S L E E A A S I L S L I V F Q A E T L S D
uvig_583537_CDS_0037 E F M S L I D K M I G E -N K S S E M A D C L W E E I S N H Y M E W Y E S L E N --------C I K -K -W (115)
L+ E A + + E + + I
AcrIE1 Q A N E L A N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_583537_CDS_0037 4 AcrIF25 0.54 View Alignment uvig_583537_CDS_0037 M K -E ---L K -T L ----Y K ----I ----------------------I Y D D L K D -S -D -M -L (60)
M + + + +
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V -L -E -E -
uvig_583537_CDS_0037 -I -G -Y -A -K -E -L -K K T ----N --------K S L ----A -D -M Y ---------M T D A K N R (120)
DA
AcrIF25 A -A -A -M -A -R -S -L -E D S P I F Y R N K L C A D G I V T I Q Q Q -A -A R -F S A A T D D A T R L D A A L W
uvig_583537_CDS_0037 L A H S Q I M H -K E F -M S -L I D K M I G E ------N K S S E M A D C L W E E I S N H Y -M E W Y E -S -L E N (180)
+ + S MA L
AcrIF25 A R E G Y Q L L S S G -L P -D S Y S G A V P N E G R T G W V T A S Q M A R L F -G G E A L W -I E R C Q -Q -E L G G
uvig_583537_CDS_0037 C I K -K -W (187)
K
AcrIF25 A G K E D G R
uvig_583537_CDS_0037 5 AcrIB2 0.50 View Alignment uvig_583537_CDS_0037 N /A (3)
N/A
AcrIB2 N /A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;