3D Structure for uvig_579868_CDS_0039 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.90 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_579868_CDS_0039 1 AcrIIA27 0.72 View Alignment uvig_579868_CDS_0039 M H M D T D Y R K -Y A -Y S G P -V -V N G -F G Q I -V A D K W T G E T M A T S P M K A R A N F A Y R I K T E L G L (60)
M+ + + +D A + A
AcrIIA27 M K -----T -F -N I I V S E S A N L K E H S S E -L -V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W
uvig_579868_CDS_0039 -V --A S A K L V L P -------G K V -T --E V L (89)
+ ++ + E +
AcrIIA27 K F N M R D L T A I D N T H R R A W G R R Y L R V E E -A
uvig_579868_CDS_0039 2 AcrIE2 0.67 View Alignment uvig_579868_CDS_0039 M H M D T D -Y R K Y A Y S G P V V N G F G Q I V A D -K -W T G E T M -A -T S P M K A R A N F A Y R I K T E L G L V (60)
M RK + + A + + LG
AcrIE2 M N T Y L I D P R K ------N N D N ----S G E R -F ------T -V -D A V D I T A A A K S A A Q Q I L G E E
uvig_579868_CDS_0039 -A S A K L V -----L P -----------------------G K V T E V L (104)
+ +V E L
AcrIE2 F E G L V Y R E T G E S N G S G M F Q A Y H H L H G T N R T E T T V G Y P F H V M E -L
uvig_579868_CDS_0039 3 AcrIC9 0.59 View Alignment uvig_579868_CDS_0039 M H M D T D Y R K Y A Y S G P V V N G F G Q I V A D K W T G E T M A T S P M K A R A N F A Y R I K T E L -G L V A S A K (60)
M Y + + + + + + + V A
AcrIC9 M E T -K M T S F Y K I T -A -Y ------N --S -Q A L Y F W G T D A D V D -R Y V D W L N R D R E I N V Y A A E
uvig_579868_CDS_0039 L V L P ------G K V ------------T ----E -V L (94)
++ +
AcrIC9 A I P E A E W A Q Y E G -R D D V L S G E E C G W -D D F M S A E A
uvig_579868_CDS_0039 4 AcrIF5 0.55 View Alignment uvig_579868_CDS_0039 M H M D T D Y R K Y A Y S G P V V N G --F G Q I -V --A D K -W T --G -E -T M -A T S P M K A R A N F A Y R I K (60)
M + + V K + P A A +
AcrIF5 M S -R --P T V V T V T E T P R -N P G S Y E V N V E R D G K M --V V -G -R A R A G S D P G A A A A K A M Q M A M
uvig_579868_CDS_0039 T E L G L V A S A K L V L P G K -V -------T E V L (89)
+ ++ K +
AcrIF5 E W G -S P -N Y V I L G S N K V L A F I P E Q L R V K M
uvig_579868_CDS_0039 5 AcrIF9 0.55 View Alignment uvig_579868_CDS_0039 M H M D T D Y R K Y A Y S G P V V N G F G Q I V A D K W -T G E T M A -T -------S P -----M K A R A N F A Y (60)
M+ Y+ V +I ++ + T +
AcrIF9 M K ---A --A Y I I K -E V Q ----N I N S E R -E G -T Q I E A T S L S Q A K R I -A S K E Q -C F -H G T V M
uvig_579868_CDS_0039 R I K T E L G L V A S A K L V L P G K V T -E V -L (86)
RI T GL + K K
AcrIF9 R I E T V N G L W L A Y K -E D G -K R W V -D C Q
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;