3D Structure for uvig_578664_CDS_0005 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.41 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_578664_CDS_0005 1 AcrIE1 0.71 View Alignment uvig_578664_CDS_0005 M A K Y ---K K P ----------T Y I I ----I -Q -E -A -M -A -------E -R -I R -F -L E D -E (60)
M K E
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E -A -A -S -I -L -S L I V F Q A E T -L -S D -Q -A N E L
uvig_578664_CDS_0005 L Y G R A -Y K D I E K L E A Q N D F L R G L C N N Q L E I I -M D Y E W -K Q M -Q E Q A I F I K A N T R K W R A R C (120)
+ + +E +E + + +
AcrIE1 A N Y -I R R Q G L E E A E G A C R N I D I M R A K W ----V -E V C G E -V N Q -H G I R V Y G D ---A I D R D V
uvig_578664_CDS_0005 S (121)
AcrIE1 D
uvig_578664_CDS_0005 2 AcrIE6 0.60 View Alignment uvig_578664_CDS_0005 M A K Y K K P T Y ----I I I Q E A M A E R I R F L E D E L Y G R A --Y K D I E K L E A Q N D F L R G L C N N Q L E (60)
M A + L D L + ++ D + +
AcrIE6 M -N ---N D -T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A
uvig_578664_CDS_0005 I I M D Y E W K Q M Q E Q A I F -I K A N T R -K W R A R C S (91)
+ + Q A+ + C
AcrIE6 E L I E I L E E Q Y P G H A A D L -S --I K N ----L C P
uvig_578664_CDS_0005 3 AcrIF23 0.58 View Alignment uvig_578664_CDS_0005 M A K Y ---K K --------P ------T Y -I ----------------I ---I Q E ---------(60)
M +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E -T -G I A Y D P S Y N Y A A N T R R A S L S P R -G I D A R A V A K
uvig_578664_CDS_0005 ------------------A M A -E R I -R -F L E D E L Y G R A Y K D I E K L E A Q N D F L R G L C N N Q L (120)
+ D L F N ++
AcrIF23 T F G G R A L T G T A R Q K E W A E K I R A -E K V -Q Q M N Q D Q A E M -A C D P S G L L T A A K F W I E N R N D S A
uvig_578664_CDS_0005 E I I M D Y E W K Q ----M Q E -------------Q -A -I -F -I K A N T R K W R A R C -S (172)
I A AR
AcrIF23 Q E I A G F V M Q -Q K A L L A -Q H R S A K A A G Q A D K -V -A -K -I -A A E Y N A L T A R W G F
uvig_578664_CDS_0005 4 AcrIIA11 0.57 View Alignment uvig_578664_CDS_0005 M A K -Y K -K --P ------T Y ----I ----------I -------I ----Q E A M ----A -E --(60)
MA
AcrIIA11 M A D M T L R -Q F C E R Y R K G D F L A K D -R E T Q I E A G W Y D W F C D D K A -L A G R L A K I W G I L -K G I T
uvig_578664_CDS_0005 --R -I R ------------------------F L E D ----E -----L -Y ---G -R A ----Y K (120)
+ L++ E + +
AcrIIA11 S D Y I L -D N Y R V W F K N N C P M V G P L Y D D V R F E P L D E E Q R D E L Y F G V A I D D K R R E K -K Y V I F T
uvig_578664_CDS_0005 ------D I E K L E A Q N D F L R G L C N N Q L E I I M D Y -----E W K Q ----M Q E ----Q -A I -F -I (180)
+ +R N + + K M E A
AcrIIA11 A R N D Y E N E C G -F N N V R E V R Q F I N G W E D E L K N E E F Y K A R E K -K R Q E M E E A N N K -F A -E -I -
uvig_578664_CDS_0005 -K -A -N T -R K W R A R C -S (197)
AcrIIA11 M -Q -R -A D E I L W N L K E D
uvig_578664_CDS_0005 5 AcrIC3 0.56 View Alignment uvig_578664_CDS_0005 M A K -Y K K P T Y -----I -I ----I -Q -E -A M -A -------E R I R -F L E D ------E -L Y G R (60)
M + I ++ LE R
AcrIC3 M S I Q V T S T N G R T V N L -E I E L G S -V -V -A S -S -G Q V K F M A D K T D R G L E S R F L V P E -A G N R R
uvig_578664_CDS_0005 A -Y -K -D I E K L E A Q N -D -F L -R -G -L C -N -N Q -L -E -I I -M -D -Y E W K Q M Q E -Q A I -F I K (120)
+ + + + + +
AcrIC3 I E V A -L -------T -G -R D -L -E -A A -N -A L -F -S -E -L A -A -S -V E A T N E -M Y -R E -L D
uvig_578664_CDS_0005 A N T R K W R A R C -S (132)
A
AcrIC3 A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;