3D Structure for uvig_578308_CDS_0029 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.61 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_578308_CDS_0029 1 AcrIE6 0.73 View Alignment uvig_578308_CDS_0029 M N A L ---D K -D -L -I G -V -Y -L -D -S -I -E G V L N G M Q L F A E -R -G -------Y ----E E L (60)
MN I + + E
AcrIE6 M N -N D T E V L E -Q -Q I -K -A -F -E -L -L -A D E L K D R L P T L -E I L S P M Y T A V M V T Y D L I G K Q
uvig_578308_CDS_0029 I E A R T D K V K Q C I E E I K G -I -L -D ----K -T -N (92)
+ R + +EE K
AcrIE6 L A S R R A E L I E I L E E Q Y P G -H -A A D L S I K N L C P
uvig_578308_CDS_0029 2 AcrIIC4 0.64 View Alignment uvig_578308_CDS_0029 M N -A -L -D K D L ----------------I G V Y ----L D S I E G V L N G M Q L F A E --R ----G -(60)
M S+ + F
AcrIIC4 M K I T S -S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E -L
uvig_578308_CDS_0029 Y E E L I E A R T D K V K Q C I E E I K G I L D ---K T N (90)
E + + + +++ +
AcrIIC4 A E K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_578308_CDS_0029 3 AcrIE1 0.62 View Alignment uvig_578308_CDS_0029 M N ---A L ---D K D ----L --------I -G V --------Y ----L D S I E G V L N G M Q L F A E R (60)
M ++++ +N + R
AcrIE1 M E K K L S D A Q V A L V A A W R -K Y P D L R E S -L E -E A A S I L S L -I V F Q A E T L S D Q A N E L A N Y I R R
uvig_578308_CDS_0029 G Y ---E E L I E A R T D K V K Q C I E E I K ----G -I -L ----D ----K -T -N (107)
E + D + E+
AcrIE1 Q G L E E A E G A C R N I D I M R A K W V E V C G E V N -Q -H G I R V Y G D A I D -R D V D
uvig_578308_CDS_0029 4 AcrIF25 0.57 View Alignment uvig_578308_CDS_0029 M N -A L ----------D K D L -I G ---V ---------------Y ---------------L D S (60)
M G +
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G -R V E A K A L S I A E V L E E A A A
uvig_578308_CDS_0029 I E G V L N G M Q ----L ------------F A -E ----R ------------G ------------(120)
L
AcrIF25 M A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q -A -A R F S A A T D D A T R L D A A L -W A R E G Y Q L L S S G
uvig_578308_CDS_0029 ----Y E -E L I ---E ----------------A -R -T -D -K -V -K Q -C -I E -E -I K G I L D K T (180)
Y + E + G+
AcrIF25 L P D S Y -S G A -V P N E G R T G W V T A S Q M A R L F G -G -E -A -L -W -I E -R -C Q -Q -E L G G A G K E D
uvig_578308_CDS_0029 -N (182)
AcrIF25 G R
uvig_578308_CDS_0029 5 AcrIF23 0.56 View Alignment uvig_578308_CDS_0029 M N -A -L ---D -------K D -L -------I G ------------------------------(60)
M+ +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_578308_CDS_0029 -V --------------Y -------L ----D ----S -I -E -G -V -L N -G -M Q L F A E R --G - (120)
L ++E
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C -D -P -S -G -L L -T -A A K F W I E N R N D S
uvig_578308_CDS_0029 ---------Y -E -E L -I E --------A R T -D -K -V K Q C I E -E -I -K -G -I L D K T --N (177)
A + V + L
AcrIF23 A Q E I A G F V M Q Q -K A -L -L A Q H R S A K A A G Q A -D -K V A K I A -A -E -Y -N -A -L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;