3D Structure for uvig_577415_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.05 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_577415_CDS_0002 1 AcrIC11 0.71 View Alignment uvig_577415_CDS_0002 M T -T Q T Q H D L A P A N Q P E F E L T V T P V P D E Q R I D F W P Q Y F G A I P Q W L L L E P H I F A W M D R F C E (60)
M+ T Q V ++ R++F FG+ E +FAW R
AcrIC11 M N K E -T --------Q ---I T A S A V V G E D K R L E F L S K H F G V R F -A R R G E A L V F A W L L R L A K
uvig_577415_CDS_0002 G Y -S G G I W S F Y T L S N G G A F M S P E P D N D E T W R L F N C L N G N D A Q M S A E A A G I A V C L I A Y S --(120)
+ YTLSN G P ++ SA+A+GI++ +
AcrIC11 V P I E W T R L Q Y Y T L S N S G F Y L A P R E -L R ----------I S E C E L S A D A V G I V A T M L T L R Q L
uvig_577415_CDS_0002 -H -H -A C R T ----E -------C ----D A M T A H Y Y R L R E Y A M Q H P E A H A I L R I I D (174)
Y +L Y H E I R+ID
AcrIC11 A -H -E S A A C V E A D S T Y P A A K L A V T A S V K F A Q Q Y H H L A A Y S V K H A E S I N I Y R A I D
uvig_577415_CDS_0002 2 AcrVIA7 0.46 View Alignment uvig_577415_CDS_0002 M T T Q T Q H D L A P A N Q P E F E L T V T P V P D E Q R I D F W P Q Y F G A I P Q W -L L L E P H I F A W M D R F C E (60)
M + + + + + E
AcrVIA7 M R ------------------I I K L --------Y E R I I P K T S S T S Y I S R W E A L N ---I P D E
uvig_577415_CDS_0002 G Y S G G I W S F Y T L S N G G A F M S P E P D N D E T W R L ---F ------N C L N G --------N D A Q M S (120)
+ D L + + ++
AcrVIA7 ----N -R N T A A W -H P R T Y L F S Y D K -D K A I N L Y N T -T N V L G N S G I K K R I I D Y P S K R E V Y I A
uvig_577415_CDS_0002 A E A A G I A V C L I A Y S H H -A C R T ----E -----C D -A -M -T -A -H Y Y -R L -R E Y A M Q -----(180)
+++ L++ + + + Y R +
AcrVIA7 N -F P R A I A D L V L T M K D Y Q L S S L H N C -C N D F F N E D -E -T -E -Q -L Y Q Y -L R S I K D N R R V D E
uvig_577415_CDS_0002 H -P E ---A H A I L R I I -D (197)
AcrVIA7 -F L K Y E F T V R Y F N D K K F
uvig_577415_CDS_0002 3 AcrVIA1_Lse 0.45 View Alignment uvig_577415_CDS_0002 M T T Q T Q H D L ------A P -A N Q P E F E L T V T P V -P D E -Q R I D F W P Q Y F G A I P Q W L -L L E P -H (60)
M DL + + E + W
AcrVIA1_Lse M I Y Y I K -D L K V K G K I F E N L M N K E A V E G L I T F L K -K A E F E I Y S R E N Y S K Y N K W F E M W K S P T
uvig_577415_CDS_0002 I F -A W M D R F C E G Y S G G I W S F -Y T L S N G G A F M S P -E P D N D E T W R L F --N C L N G N D A Q M S A E (120)
++ Y + G + + +E
AcrVIA1_Lse S S L V F W ----K N Y -S F R C H L L F V I E K D G E C L G I P A S V F E S V L Q I Y L A D P F A P D T K E L F V E
uvig_577415_CDS_0002 A A G I A V C L --------I -A Y S ----H H A C ----R ---------T ---E ------------(180)
+ + CL H++
AcrVIA1_Lse V C N L Y E C L A D V T V V E H F E -A E E S A W H K L -T H N E T E V S K R V Y S K D D D E L L K Y I P E F L D T I A
uvig_577415_CDS_0002 -----------C -D A M T A H Y Y R L R E Y A M Q -H --------------------P E A H -A -I - (240)
+ + +
AcrVIA1_Lse T N K K S Q K Y N Q I -Q G K I Q E I N K E I A T L Y E -S S E D Y I F T E Y V S N L Y R E S A K L E Q H S K Q -I -L
uvig_577415_CDS_0002 L R I I D (245)
+
AcrVIA1_Lse K E E L N
uvig_577415_CDS_0002 4 AcrIE6 0.45 View Alignment uvig_577415_CDS_0002 M T T Q T Q H D L A P A N Q P E F E L T V T P V P D E Q R I D F -W -P Q Y F G A I P Q W L L L E P H I F A W M D R F C (60)
M + + T V Q F
AcrIE6 M -N ----------------N D T E V --------L -E -Q -------------Q ----I K A F E
uvig_577415_CDS_0002 E G Y S G -G -I -W -S -F -Y T L S N G G A F M S P E P D N D E T W R L F N C L N G N D A Q M S A E A A G I A V C L (120)
+ L+ + +
AcrIE6 L L A D -E -L -K -D -R -L P -------------T L E I -------L S P M Y T ----A V M V T Y D L I
uvig_577415_CDS_0002 I A Y S -H H A C R T E C D A -M -T A -H -Y Y R L -R E Y A M Q H P E A H A I L R I I -D (167)
A + E H I +
AcrIE6 G K Q L A --------S -R -R -A E -L -I E I L E E Q Y P G H A A D L S I K -N L C P
uvig_577415_CDS_0002 5 AcrIF14 0.44 View Alignment uvig_577415_CDS_0002 M T T Q T Q H D L A P A N Q P E F E -L T V T -P -V P D E Q R -I ---D F -W P Q Y -----------F -G A I (60)
M ++ N + +
AcrIF14 M K K I E M I E I S Q -N -R Q --N -L T -A -F -L H I S E I K A I N A -K L A D -G V D V D K K S F D E I C S I -
uvig_577415_CDS_0002 ----P -Q W -L L L E P H I F A W M D R F C E G Y S G G I W S F Y T L S -N G G A F M S P E P D N D E T W R L F N C (120)
+ + + S P
AcrIF14 V L E Q Y Q A -K Q I S N K Q A S E I F E T L A K A N K S F K I E K F R C S H G Y N E I Y K Y S P -----------
uvig_577415_CDS_0002 L -N G N D A Q M S A E A A G I A V C L I A Y S H H A C R T E C D A -M T A H Y Y R L R E Y A M Q H P E A H A I L R I I (180)
+ Y + L + E R
AcrIF14 D H -----------E A ----Y L F Y C K -------G -G ----Q G Q L N K L I -A --E N ---G R -F
uvig_577415_CDS_0002 D (181)
AcrIF14 M
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;