3D Structure for uvig_576349_CDS_0064 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.24 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_576349_CDS_0064 1 AcrIE6 0.65 View Alignment uvig_576349_CDS_0064 M N E M Q K E I S Q R R I V K L I E A K K L I K E V I H Y D H ---S ----E ---K S K Y K T I V N M I D E V V V D (60)
MN E+ I + +K+ + + +++
AcrIE6 M N -N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E
uvig_576349_CDS_0064 E L K -V -Q -E ---K -S --M Q V L K Q (83)
L L
AcrIE6 I L E E -Q -Y P G H A -A D L S I K N L C P
uvig_576349_CDS_0064 2 AcrIE1 0.60 View Alignment uvig_576349_CDS_0064 M N E M ---Q K E I S ----------Q -------R -R -------I V K L I E A K K L I K E V I H -Y -D (60)
M + + L + + I+
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I -L S L I V F Q A E T L S D Q A N E L A N Y I R R -Q G
uvig_576349_CDS_0064 H S -------E K S K Y K T I V N M I D E V V V -D E -L K V Q E K S M Q V L K Q (103)
+ + V ++V
AcrIE1 L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R V Y G D A I D R D V D
uvig_576349_CDS_0064 3 AcrIIC4 0.56 View Alignment uvig_576349_CDS_0064 M N --E M -Q K E -I S ----Q -------R ----R -I -V K L I E A K K L I K E V I H Y D ---H S E K S K (60)
M ++ A + K
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P -I -K G L F K S A V E Q F S S A R D F F K N E N Y S K E L
uvig_576349_CDS_0064 Y K T I V N -M I -D E -V V V -D E L K V Q -E K -S M Q V L -K Q (95)
+ +V L +
AcrIIC4 A E K F N K E -A V N -E -A V E K -L Q K A I D -L A E K Q G I Q F
uvig_576349_CDS_0064 4 AcrIIA28 0.55 View Alignment uvig_576349_CDS_0064 M N -E M ---Q K -E -I S Q ----R R I V K -L I -E A K K L I K E V I H Y D H ------S ----E ----K (60)
M Q + + + + +
AcrIIA28 M K T I F T K K Q T E -E L L N D I S I E K Q K E L -F N S M H D F R S -Q H A K E A R I P G W S D K Y N K L E K K M L
uvig_576349_CDS_0064 S K Y K T I V N M I D E V V V D E L K V -Q -E K -S -M Q V -L -K Q (96)
S + + + EL + L +
AcrIIA28 S D F E E V T G I K Y D T L E S E L I -W -D N -L -S -N K F L Y N S
uvig_576349_CDS_0064 5 AcrIF23 0.54 View Alignment uvig_576349_CDS_0064 M N E M --Q K E -I ---S -----------Q ---------------------------------(60)
M+ + + +
AcrIF23 M T N F Q T W L D S A D I P -V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_576349_CDS_0064 ------------R -R I V K L -I -E A K K L I K E V I -H -Y D H S E K S K Y K T I V N -M I D ----E -V (120)
E + S T++
AcrIF23 G G R A L T G T A R Q K E W A E K I -R -A E K V Q Q M N Q D -Q -A E M A C D P S G L L T A A K F W -I E N R N -D S
uvig_576349_CDS_0064 V V -------D -E L K ----V ----Q ---------E ----K S M Q V -L ---K -Q (171)
+ K ++
AcrIF23 A Q E I A G F V M -Q -Q K A L L A Q H R S A -K A A G Q A D K V -A K I A A E Y N A L T A R W -G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;