3D Structure for uvig_574999_CDS_0025 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.48 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_574999_CDS_0025 1 AcrIIA7 0.73 View Alignment uvig_574999_CDS_0025 M G Y K Y K V I M K K F I G T K V I M A M P M T M T E A Q K V L G R E L K P A T D E E D G Y L V E Y D N G Y K S W S P K (60)
M +
AcrIIA7 M -T -F G Q A L E S L K R ----------------------------------------------
uvig_574999_CDS_0025 S V F E K A Y R E V G S V N F G G A I N L L K A G L A V R R K G W N G K G L F I V K Q V P A H I T G -D I I P K M Q S L (120)
+V RKGWNGKG FI + I+ SL
AcrIIA7 ------------G ------------H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V K S L
uvig_574999_CDS_0025 P Q I A K D I L M K ----R -E N P H I D Y T N Q M L I I N P D G R A -D S W V P S S S D V F A E D W E V A T D (177)
P K + E+ +I T DG + W+ S++D A DW ++ +
AcrIIA7 P E S F K R W V A N N H G D -S E T D R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V -E
uvig_574999_CDS_0025 2 AcrIC1 0.53 View Alignment uvig_574999_CDS_0025 M G Y K Y K V I M K K -F I -G T K V I -M A M P M T M T E A Q K V L G R E ----L -K P A T D --E -E -D G Y L V (60)
M + K + T T + V + + ++
AcrIC1 M N N ----L K K T A I T H D G V F A Y K -N --T E T V I G S V G R N D I V M A I D A T -H G E F -N -D K N F I I
uvig_574999_CDS_0025 E Y -D N G Y K S W -S P --K -S -V F E -K ---A -Y ---R ---E --------V -G S V -N F -G G -A I (120)
NG + + + +
AcrIC1 Y A D T N G N P I Y L G Y A Y L D -D -N N D A H I D L A V G A C N E D D D F D E K E I H E M I -A -E Q -M E -L -A
uvig_574999_CDS_0025 -N L -L K -A -G L A ----V R -R -K G W N G K G L F I V K Q V P A H I T G D I I P K M Q S L P -Q I A K D I L M (180)
G V+ + D
AcrIC1 K R -Y -Q E -L G D T V H G T T -R -L A F D D D G -Y M T V R L D Q Q -A Y P D -------Y R P -----E --
uvig_574999_CDS_0025 K -R -E N P H I D Y T N Q M L I I N P D G R A D S ---W -V --------P S S S D V F A E D W E V A T D (236)
L+++ G+ V S A+DW
AcrIC1 -N -D --D -K H I M W R A L A L T A T G K E L E V F W -L V E D Y E D E E V N S W D F D I A D D W R E --L
uvig_574999_CDS_0025 3 AcrVIA3 0.53 View Alignment uvig_574999_CDS_0025 M G Y K Y K -V I M -K K F I G T K V I M A M P M T M T E A Q K V L G R E L K P A T D E -E D G -Y L -V E Y D N G Y K (60)
M K K ++
AcrVIA3 M -F --K E -F L E K C L R ----------------------------Y G --N L -Y I -L E E T ---
uvig_574999_CDS_0025 S W S P K S V -F -E K A Y R E V G S V -N F G G A I N L L -K A G L A V R R K G W N -G K G L F I V K Q V P A H I T -(120)
K + + G + ++ + +
AcrVIA3 -----G -D -R -K K V K R I S K -R -H G K V ----T -E A S V L L F D S G T K R T -T --I --------N
uvig_574999_CDS_0025 G D I I P K M -Q S L P Q I A K D I L -M K R E N P H I D Y -T N Q M -L I I N P D G R A D S W V P S S S D V -F A E D (180)
+ + I + +E
AcrVIA3 E -----I Y -----------L --------N -S Q G -Y F I -I R D -Q K --------R L -K -L E K
uvig_574999_CDS_0025 W E V A T D (186)
AcrVIA3 ---F -K
uvig_574999_CDS_0025 4 AcrIF18 0.50 View Alignment uvig_574999_CDS_0025 M G Y K Y K V I M K K F I G T K V I M A M P M T M T E A Q K V L G R E L K P A T D E E D G Y L V E Y D N G Y K S W S P K (60)
M +
AcrIF18 M T --------T I K A A Y I S K -D ---------------------------------------
uvig_574999_CDS_0025 S V F E K A Y R E V G S V N F G G A I N L L -K A -G L A V R R K G -W N G K -G -L F -I V K Q V P A H I T G D I I P (120)
+ NG F +V
AcrIF18 ----------Q N -----W ----N -D G -T T T Y W F D V -N G -E -T -F G V V -H G ----------
uvig_574999_CDS_0025 K M Q S L P Q I A K D I L M K R E N P H -I -D Y T N -Q M L I I N P D G R A D S -W V -P S S S D V F A E D W E V A T (180)
++ DG + + + +
AcrIF18 ---------------G ----E -S --W -N -A K V V D C D G A P S D Q -Y T V D Q F N I ---T E D M I A
uvig_574999_CDS_0025 D (181)
+
AcrIF18 E
uvig_574999_CDS_0025 5 AcrIIA4 0.49 View Alignment uvig_574999_CDS_0025 M G Y K Y K V I M K K F -I G -T K V -I M A M P M T M T E A Q K V L G R E L K P A T D -E E D G Y L V E Y -D N G Y K (60)
M + + + ++ G
AcrIIA4 M -N -I N D L I R E I K N K D Y T -V K L -S G T -------D -----S --N -S -I T Q L I I R V N N D G N E
uvig_574999_CDS_0025 S W S P K S V F ----E -K A -Y ---R E V G S V N F G G A I N L L K A G L A V R R -K G W N G K G L F I V K Q V P (120)
S K + + +
AcrIIA4 Y V I S E S E N E S I V -E K -F I S A F K N G W N Q E Y E D E E E F Y N D M Q T I T L K S --E -----------
uvig_574999_CDS_0025 A H I T G D I I P K M Q S L P Q I A K D I L M K R E N P H I D Y T N Q M L I I N P D G R A D S W V P S S S D V F A E D W (180)
AcrIIA4 ------------------------------------------------------------
uvig_574999_CDS_0025 E V A T D (185)
+
AcrIIA4 --L -N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;