3D Structure for uvig_574835_CDS_0237 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.23 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_574835_CDS_0237 1 AcrIB1 0.84 View Alignment uvig_574835_CDS_0237 M T D L S N Q C V E E L L ---T R E S -N T H F T L V G D F C C -G A D D P L N T F L S D N S F D Y A E D K Q G H T Y (60)
M N + LL N G + FL + TY
AcrIB1 M E S K -N --L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y
uvig_574835_CDS_0237 I L L D K D K T S I L A F Y T V K A N A I H T Y D E C I D E ----------Y ---------T -A L P V V E I S (120)
++ + + IL T+ + E +
AcrIB1 V V F S -E D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K L G N S A A I L K N G D -L M T S S F L L G
uvig_574835_CDS_0237 R I A V E Y G I -Q -G S G V G T V L F T D Y I V P K I I T V S K I I A I Y G I I V F V D A D N D Q G I R F Y K S L G F (180)
+ Y G L T + + + +I + I + I FY + GF
AcrIB1 Q L G K N Y S D D I E N L I T G R E L L T -F A Y D L F L K I K E L I N V K Y I W L E C Q -N E P K L I S F Y Q N F G F
uvig_574835_CDS_0237 Q R A N E E T Q H A V G D S Y N E K C E L Y V L K L -D D I K E (212)
+ + + + ++
AcrIB1 K M L E S L -T ---S -E -E G -L K V M I ---M -E L -K
uvig_574835_CDS_0237 2 AcrVA5 0.57 View Alignment uvig_574835_CDS_0237 M T D -L S N Q C -V E E L L T R E S N T H F T L V G D F C C G A D D P L N T F L S D N S F D Y A E D K Q G H T Y I L L (60)
M LS + +
AcrVA5 M K I E L S G G Y I C Y S I -------------------E --------------------------
uvig_574835_CDS_0237 D K D K T S I L A F Y T V K A N A I H T Y D E C I D E Y T A L P V V E I S R I A V E Y G I Q G S G V G T V L F T D Y I V (120)
V I + V +G+G+ L
AcrVA5 -----------------------E -------D E V T I D M V E V T -T -K R Q G I G S Q L I D ----
uvig_574835_CDS_0237 P K I I T V S K I I A I Y G I I V F V -D A ---D -N D Q G I R F Y K S L G F Q R A N E E T Q H A V G D S -Y N E K C (180)
+ V + + I + + ++ I FY S F + +
AcrVA5 -M V K D V A R E V -G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P -D --D -----V --D -G
uvig_574835_CDS_0237 E L Y V L K L D D I K E (192)
L
AcrVA5 R L M -R ----W -S
uvig_574835_CDS_0237 3 AcrVIA1_Lse 0.40 View Alignment uvig_574835_CDS_0237 M T -D L ----S N Q -C V E E -L L T R E S N T -H F -T L -V ---G D ---F --C C G A D ----D P L N T F (60)
M + E L + F
AcrVIA1_Lse M I Y Y I K D L K V K G K I -F E N -L M -N K E -A -V E -G L I T F L K -K A E F E I Y S R E N Y S K Y N K W F E M
uvig_574835_CDS_0237 L S D N S F ---D -Y A E D --K -Q -G H -T Y I L L D K D K T S I L A F Y T --------V K A --N A I H T Y (120)
+ +++KD L + +
AcrVIA1_Lse W K S P T -S S L -V F W K N Y S F R -C H -L L -F V I E K D -G E C L G I P A S V F E S V L Q I Y L A D ------
uvig_574835_CDS_0237 D -E C I D E ---Y T A ---------L P -V V E -I S R I A V E Y G I Q G -S -G V G -T ----V -L F T --(180)
L V + + +E +
AcrVIA1_Lse P F ---A P D T K E L F V E V C N L Y E C L A D -V T V V E H F E A E E S A W H K L T H N -E -T E V S K R -V Y S K
uvig_574835_CDS_0237 ------D -Y I V -P K I I -T V S K I I A I Y G I I V F V ----D -A -D N D Q G I R F Y K S L G F Q R A N E E (240)
YI + + N + Y S
AcrVIA1_Lse D D D E L L -K Y I -P E F -L D -T I A T N K K S Q K Y N Q I Q G K I -Q -E I N K E I A T L Y E S S E D Y I F ---
uvig_574835_CDS_0237 T -Q H A V G D S -Y N E K -----C E L Y V L -K L -D -D I K E (275)
V Y E
AcrVIA1_Lse -T -E Y V S N -L Y R E -S A K L E Q H S K Q -I L -K -E -E L N
uvig_574835_CDS_0237 4 AcrIB5 0.40 View Alignment uvig_574835_CDS_0237 M T D L -S ------N -Q -C -V -E E -L L T -R E S N T H F T L V G D F C C G A D D P L N T F L S D N S F D Y A (60)
M L + + + + N A
AcrIB5 M A G F I K K Y L D S R -G -W -T -I Y -Q -L G N -A T G L A H Q T I R S A D S K T V ---D Q L S A K N V R L I A
uvig_574835_CDS_0237 E D K Q G H T Y I L L D K D K T -S I L A F -Y T V K A N A I H T Y D E C I D E Y T A L P V V -E I S R -I A V E Y G I (120)
E + + E I +
AcrIB5 E V F -----------H -F -T A G E I L -D -------------E ---F --Y E -I E E E -I T N D -E
uvig_574835_CDS_0237 Q G -S G V G T V L F T D Y I V P K I I T V S K I -I A -I Y G -I I V F V D A D N D Q G I -R F Y K S L G F Q R A N E (180)
T +F +S ++ I D D I + +
AcrIB5 I -L -K E L T T V F E K H G -H N T D E I S -S E L L D G -E T I -K L -D M T -D D N I T K L A D A V N A --T E H
uvig_574835_CDS_0237 E T -Q H A V -G -D S Y N E -K C E -L Y V L K L D -D I K E (212)
+ + + +
AcrIB5 F -T -A Y L D -S ---S -T -D -Y M I -V ---E -A T Q
uvig_574835_CDS_0237 5 AcrIA1 0.40 View Alignment uvig_574835_CDS_0237 M T -D L ------------------------------------------S -N Q ---------(60)
M
AcrIA1 M R S K M I K K E E K D N K I Y I T V K D E E T G I E W T A V V E K V E F E W C V K Q K E E L E V E -D A E K S V M L D
uvig_574835_CDS_0237 -C V ---------------E E L L T R ----E S N T H F T -L -------------------V G D - (120)
LT+ + +
AcrIA1 Y A -L F G N C A I P K V T A E E Y K N S L T K Y T G E K M S R L L H I -L Y N Y E I V S Q N D T K N I W V T E L S R C
uvig_574835_CDS_0237 ---F ----C C -G ----------A D D P L N T -F L S D -N S F D -Y A E D K Q G H T Y I L -L -D K D K T (180)
+ + + +
AcrIA1 L R R S Y L M R K -E -G K T K V G L N E A M K M H I G S G L H -M R L Q -S L L R K H G F E T E V R V Q R K T A L G F
uvig_574835_CDS_0237 S I L A F Y T -V K -A N A I H T Y D E C I D E Y T A L P V V E I S -R I A -V E -Y G I Q G S G V G T -V L F T D Y I (240)
+I+ E V+ + + V
AcrIA1 Q I V G R I D V Y -D -K ------E ------E -N V I Y --E -L K Y -T H N D K ----L D -S V R -L N N Y
uvig_574835_CDS_0237 V P K I I T V S K I -I A I Y G -I I V F V D A D N D Q G I R --F Y K S -L G F -Q R A N E E T Q H A V G D S ----(300)
+ + + +V V AD + + +
AcrIA1 L R Q L N Y Y I E M A -N A M K G Y L V I V H A D G S -V E E I K R -D -W -A -E ---T -D L E K -R A N -A F G I
uvig_574835_CDS_0237 Y --N --E ---K -----C E ----L Y V L K -L D D -I -K -E (337)
AcrIA1 -Y V E E N T L P P -K K S R P D A E C I E ---C P F -Y N F C W G K L
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;