3D Structure for uvig_573736_CDS_0134 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.36 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_573736_CDS_0134 1 AcrIB1 0.72 View Alignment uvig_573736_CDS_0134 M I Q Y Q H W -----------------------------------------E --D ---S I R I L (60)
M S +
AcrIB1 M E -S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K -S S I S S T Y V
uvig_573736_CDS_0134 -V T -D E L H H G S I Q A F I P H C T -----E D K P ---L -----D ------------G -E A D A L I Y (120)
+ D G ++ L+
AcrIB1 V F S E D N E I L G Y F T I A N R S L V I P K E N F G -I L S K -T Q Q K K -L G N S A A I L K N G D L M T S S F L L G
uvig_573736_CDS_0134 S L W V D E -A H -R -G H E V A ----K -H L M -E -A V E R -E L K -R C G I E T V A I S W E G R D S P L W V L H (180)
+L + + + + + ++
AcrIB1 Q L G K N Y S D D I -E N L I T G R E L L -T F A -Y -D L F L -K I K -E L I N V K Y I W L E C Q --N -E P K L I S
uvig_573736_CDS_0134 W Y K K L G F E E K A F ---G Y Q C C T L L K R -L (207)
+Y GF +
AcrIB1 F Y Q N F G F K M L E S L T S E E G L K V M I M E L K
uvig_573736_CDS_0134 2 AcrVA5 0.69 View Alignment uvig_573736_CDS_0134 M I Q Y Q -H W E D S I R I L V T D E L H H G -S I Q A F -I -P H C T E D K P L D G E A D A L I Y S L W V D E A H R G (60)
M + I E ++ I + V +
AcrVA5 M -K I -E -L --------S G -G ---Y -I C Y S I -E -----------E D E V T I D M V E V T -T -K R
uvig_573736_CDS_0134 H E V A K H L M E A V E R E L K R C G I E T V A I S W E --G R -D S P L W V L H W Y K K L G F E E K A F G Y Q C C T L (120)
+ L + V ++ + + S ++ +Y FE
AcrVA5 Q G I G S Q L I D M V K D V A R E V -G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D G R L M
uvig_573736_CDS_0134 L K R L (124)
AcrVA5 R -W S
uvig_573736_CDS_0134 3 AcrIA3 0.41 View Alignment uvig_573736_CDS_0134 M I Q Y Q H W E D S I R -I -L V T D E L H H G S I Q A F I P H C T -E D K P L D G E A D A L I Y S L W V D E A H R G H (60)
M + + +
AcrIA3 M S -------F Y I M -Y -I K V K E -----------M S E ------Q K ---Q -I -----S -L --R
uvig_573736_CDS_0134 E V A K H L M E A V E R E L K R C -G -I E T V A I S W -E G ---R ----D S -P L W V -L -H W -Y K K -----(120)
K L + + + + Y
AcrIA3 S K Q K E L L Q R F F E I A E V D E -N G D L C I P -L Y D S S G D L T L F K Q D S R -K Y Q -M -Y A Y -F R I L R L
uvig_573736_CDS_0134 --L -G --F -E E K A F G Y Q ---------C -C T L L K -R -L (157)
K ++
AcrIA3 I K K Q I F F -I K V K K V K R D K K F L C M H S N V I D Q V K S V L E S
uvig_573736_CDS_0134 4 AcrIIC3 0.41 View Alignment uvig_573736_CDS_0134 M I Q Y Q H W E D S I R -I L V T -D ---------E ----L H H G S I ----Q A F I P H C T E D K P L D G E A (60)
M I + +
AcrIIC3 M -F ------K R A I I F T S F N G F E K V S R T E K R R L A K I I N A R V S I I D E Y L R A K D T N -A S L D G -
uvig_573736_CDS_0134 D A L --I Y S L W V D E A H R G H E V A K H L M E A V E R E L K R C G I E T V A I S W E G ---R D S -P L W V -L H (120)
+ + + + C ++ + P
AcrIIC3 ---Q Y -R A F L F N D ---E S P A M T E F L A K L K A F A E S C T G I S I D A W E I E E S E Y V R L P -V E R R D
uvig_573736_CDS_0134 W Y K K L G F E E K A F G Y Q C C T L L K R L (143)
+ + + ++
AcrIIC3 F L A A A N --------G -K E I -F K I
uvig_573736_CDS_0134 5 AcrIF5 0.40 View Alignment uvig_573736_CDS_0134 M I Q Y Q H W E D S I R I L -V -T D E L H H G S I Q A F I P H C T -E D K P L D G -E A D A L I Y S L W V D E A H R G (60)
M + + + +
AcrIF5 M -S -----R P T V V T V -T E T P R -------N P G S -Y E ----V N V E R D G K M V V G R A -R A G ---
uvig_573736_CDS_0134 H E V A K H L M E A V E R E L K R C G I E T V A I S W E G R D S P L W V L H W Y K K L G F -E E K -A -F -G -Y Q C C (120)
+ + + G + +I S
AcrIF5 -S D P G A A A A K A M Q M A M E W G S P N Y V I L G ----S -------N -----K -V L A -F -I -P -E Q -
uvig_573736_CDS_0134 T L L K R L (126)
+
AcrIF5 L -R V K M
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;