3D Structure for uvig_568562_CDS_0207 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.10 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_568562_CDS_0207 1 AcrIE6 0.73 View Alignment uvig_568562_CDS_0207 M I -S E D K I K N L I K C Y E D D L K L L E Q N Y K D N K -D ---E D ----L N W L Y I R N I G L T E G T -I K -(60)
M + + + IK E + L L +++ I
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I -E
uvig_568562_CDS_0207 G L K I A L G H K T -K L E L -K -S K (80)
L + L +
AcrIE6 I L E E Q Y P G H A A D L S I K N L C P
uvig_568562_CDS_0207 2 AcrIIC4 0.58 View Alignment uvig_568562_CDS_0207 M -I S E D K I K ------------N L I K --------C Y E D D ----L K L L E Q N Y K D N K D E D L N W (60)
M I+ L + K
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P -K N H R E P I K G L F K S A V E Q F S S A R D F F K N E --N Y S K E
uvig_568562_CDS_0207 L Y I -R N I G L T E G T I K G L K I A L -G H K T K L -E L -K S K (95)
L N + + L A +
AcrIIC4 L A E K F N K E A V N E A V E K L Q K A -I D -L A E -K -Q G I Q F
uvig_568562_CDS_0207 3 AcrIE1 0.56 View Alignment uvig_568562_CDS_0207 M -I ----S E D -K I K -----------N L I K ----------C -Y E D -D L ----K L L E Q N Y K D (60)
M + + + L L + +
AcrIE1 M E K K L S D A Q -V A L -V A A W R K Y P D L R E S L E E A A S I L S L I V F Q -A E T -L S D Q A N E L A N Y I R R
uvig_568562_CDS_0207 N K D E D L N W L Y I R N I G L T E G T I K G L K I A L ---G H K T -K L E L -K S -K (105)
+ + RNI + + + G + + +
AcrIE1 Q G L -E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_568562_CDS_0207 4 AcrIF23 0.55 View Alignment uvig_568562_CDS_0207 M I -S E D K I K ---N L --I K ------------------------------------------(60)
M +
AcrIF23 M T N F Q T W L D S A D I -P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_568562_CDS_0207 ----------------------------------C -Y E D D L K L -L E Q N Y K D N K D E D L N W L (120)
C L +N+ D
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D -P S G L L T A -A K F W I E N R -N D S A Q E
uvig_568562_CDS_0207 Y I -R N I G L -T -E G T I K -G L K -I A -L ----G -H -----K ---T K L E L K -S --K (172)
+ + K L
AcrIF23 I -A G F V M -Q -Q K A L L -A Q H -R S -A -K A A G -Q -A D K V A K I A A E Y N A L T A R W G F
uvig_568562_CDS_0207 5 AcrIIA28 0.54 View Alignment uvig_568562_CDS_0207 M I ------S E D K -I K -N L ----I K C Y E D D L K -L L E -Q N Y K D N K D E D L N W L Y I R N I G L T E G (60)
M + + + K + Q K+ + + Y +
AcrIIA28 M K T I F T K K Q T E E L -L N D I S I E K Q K E L F N S M H D -F R S Q H A K E A R I P G W S D K Y N K L E K K M L S
uvig_568562_CDS_0207 T I K G L -K -I -A L G -H --------K T K L E L -K S K (93)
+ +
AcrIIA28 D F E E V T -G -I K -Y D T L E S E L I W D N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;