3D Structure for uvig_568193_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.84 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_568193_CDS_0004 1 AcrIIA11 0.68 View Alignment uvig_568193_CDS_0004 M E N I T V R E W V N K F N N K E F E S K N R A V Q C N A G W Y D W F C S D D A L A G R L K K I G N I I K D I K S D Y I (60)
M T+R + + +F K R Q AGWYDWFC D ALAGRL KI I+K I SDYI
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C D D K A L A G R L A K I W G I L K G I T S D Y I
uvig_568193_CDS_0004 L D N F R V W F K N N C P C S Y P L Y D D F R F E P I M K N G K D S D D S I R D Q L Y F G V Q C G H P F G S E Y M Y E I (120)
LDN RVWFKNNCP PLYDD RFEP+ + RD LYFGV Y I
AcrIIA11 L D N Y R V W F K N N C P M V G P L Y D D V R F E P L D ---E ---E -Q R D E L Y F G V A I D D K R R E -K K Y V I
uvig_568193_CDS_0004 F T A R N G Y S V E F K C K ---N K R E -V L -N -V ---I E Q -------L -----------------A (180)
FTARN Y E R + +
AcrIIA11 F T A R N D Y E N E C G F N N V R E V R Q F -I N -G W E D E L K -N E E F Y K A R E K K R Q E M E E A N N K F A E I M
uvig_568193_CDS_0004 E D ----F Q -K E -M -E (195)
+
AcrIIA11 Q -R A D E I L W N -L K E D
uvig_568193_CDS_0004 2 AcrIB9 0.58 View Alignment uvig_568193_CDS_0004 M E N I T V R E W V N K F N N K E F -E S K N R A V Q C N A G W Y D W F C S D D A L A G R L K K I G N I I K D I K S D Y (60)
M E K + + KI
AcrIB9 M N K F A F -E N -----D K Y L E -------R -------------N I K A V V E K I A R D F N L H L K S K
uvig_568193_CDS_0004 I L D N F -R V -W F -K N N C P C S Y P L -Y D D F R F E P I M K N G K D S D D S I R D Q L Y F G V Q C G H P F G S E (120)
N + F I +N D +E
AcrIB9 Y S K D C E -F T V -V A D N -S F D N -I E N -S T I F L E I K R N D ---G K A C Q D H H I Y A E Y E C D E D D N E
uvig_568193_CDS_0004 Y M Y E I F T A R N --G Y S V E ---F K -C ----K --------N K ----R -E V -L -N -V I E -Q ---(180)
Y + K + +
AcrIB9 Y I A L T V K F Y G S S A S N Q I N T V Q -G -I K S S K Y A S C I V S D T -D N Q L S K S -I -H -E L N -L -K K E
uvig_568193_CDS_0004 -L ----------------------------A ---E -------D ----F -Q K E -M E (235)
D
AcrIB9 K -E Q Q E A W N K K E A E Y A R K K Q A Y V S Q S Q R E K Y E D I F D L P F D F Y D Y I D K -K E Q G L -I
uvig_568193_CDS_0004 3 AcrIB2 0.54 View Alignment uvig_568193_CDS_0004 N /A (3)
N/A
AcrIB2 N /A
uvig_568193_CDS_0004 4 AcrIIA24 0.53 View Alignment uvig_568193_CDS_0004 M E N I T V R E W V N K F N N K E F E S K N R -A V Q C -N A G W Y D W F C S D D A L A G R L K K I G N I I K D I K S D (60)
M + + + + I I
AcrIIA24 M K --K A Q Q L L K E I K T N N -V -S Y A I --M D E ---D N E I Y -C N K E T N ----N I M D I Y G Y D N --
uvig_568193_CDS_0004 Y I L D N F R V W F K N N C P C S -Y P L Y D D F R F E P I M -K N -G K D S D D S I R D Q L Y F G V Q C G H P F G S E (120)
F + D + SDD I + + G
AcrIIA24 -E N G H F Y G V -Y ------G D -V V D G Q I -----D -S R -Y F S D D A I L N A I D K L L F L ----G D P
uvig_568193_CDS_0004 Y M Y E I F T A R N G Y S V E F K C K N K R E V L N -V -I E Q L A E D F Q K E M E (162)
F E
AcrIIA24 --I --------K R --T D L ------P -S -D -A D F K R T F F F -E E
uvig_568193_CDS_0004 5 AcrIIA5 0.51 View Alignment uvig_568193_CDS_0004 M E N I T V R -E W V N K F N N K E F E S K N R A V Q -C N A G W Y D W -F -C S D D A L A G R L K K I G N I I K D I K (60)
M N + F + A ++ + +
AcrIIA5 M A Y G K --S R -Y N S Y R K R S F ------N -R --------S -N K Q R R E Y A Q E M D R L E K A F E N L D
uvig_568193_CDS_0004 S D Y I L D N F R V W F K N N C P C S Y -P L Y D D F R F E P I M K N G K D S D D S I R D Q L Y -F -G -V Q C G H P F (120)
Y+
AcrIIA5 G W Y L S S ------M -K D S A Y K D -F G -K Y E I R L S -N H S A ------D N K Y -H -D -L -E N ----
uvig_568193_CDS_0004 G S E Y M Y E I -F T A R N G Y S -V E F K C K N K R E V L N V I E Q ----L A E -------------D ----(180)
+ + ++ I+
AcrIIA5 --G R L I V N I K A S K -L N F V -D I I E N K L D K I I E K I D K L D L D K Y -R F I N A T N L E H D I K C Y Y K G
uvig_568193_CDS_0004 --F -Q K E M E (189)
KE
AcrIIA5 F K T K -K E V I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;