3D Structure for uvig_566094_CDS_0007 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.37 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_566094_CDS_0007 1 AcrIE6 0.75 View Alignment uvig_566094_CDS_0007 M S -L V S K I K N E I Q E A E K T I I L C N A Q L L D A V E Q Q ---D E S S C C Y -W K A -K A A N A H G K I S A L (60)
M+ + + I E + L + ++ + L
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E -I L S P M Y T A V M -V T -Y D L I G K Q L A S R R A E L
uvig_566094_CDS_0007 N D V L D W I ----K -E N -I ---G -E (83)
++L+
AcrIE6 I E I L E E Q Y P G H -A A D L S I K N L C P
uvig_566094_CDS_0007 2 AcrIE1 0.67 View Alignment uvig_566094_CDS_0007 M -S ---L -V S -K I -K -------N ----E -I -----Q -E -------A E K -T -I -I -L C N A Q (60)
M
AcrIE1 M E K K L S D A Q -V A -L -V A A W R K Y P D L R E -S -L E E A A -S -I L S L I V F Q A E T -L -S -D -Q A N E
uvig_566094_CDS_0007 L L D A V E Q Q D E S S C C Y W K A K A A N A H G K I S A L N -D V ---L D W I K -E -N -I --G --E (114)
L+ + Q + + K + +V + +
AcrIE1 L A N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G -D -A -I D R D V D
uvig_566094_CDS_0007 3 AcrIIC4 0.62 View Alignment uvig_566094_CDS_0007 M S -L V S ---K I K -------------N E -I -Q -E ----A E K T I I -L C N A Q L -L D A V E Q -Q D (60)
M S I + K+++ ++
AcrIIC4 M K I T S S N F A T I -A T S E N F A K L S V L P K N H -R -E -P I K G L F K S A V E -Q F S S A R D F F K N E N Y -
uvig_566094_CDS_0007 E S S C C Y W K A K A -A -N A H G K I S A L N D V L D W I K E N I -G -E (98)
S + + L+ ++D +
AcrIIC4 --S K E L A E K F N K -E A V N E A V E K L Q K A I D L A E K -Q G I Q F
uvig_566094_CDS_0007 4 AcrIF23 0.58 View Alignment uvig_566094_CDS_0007 M S L -V S K I ---K --------N E I Q ------------------------------------(60)
M+ + + + I
AcrIF23 M T N F Q T W L D S A -D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_566094_CDS_0007 ------------E ------------A ----E K T I I L C N A Q L L D A V E Q Q D E S S C C Y W K A K A (120)
E + LL A+ E+ +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q -M N Q D Q A E M A C D P S G L L T A A K F W I E N R -N D S A Q E I
uvig_566094_CDS_0007 A N A H G K I S A L N --------D V -----L -D ----W -I -K E N -I G ---E (167)
A AL
AcrIF23 A G F V M Q Q K A L L A Q H R S A K A A -G Q A D K -V A K I A A -E -Y N A -L T A R W G F
uvig_566094_CDS_0007 5 AcrIC3 0.57 View Alignment uvig_566094_CDS_0007 M S -L V S -K I K ----------N -E -I Q -E -A E ------K ----T I I -------L C N -A -Q L (60)
MS V+ + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G -S -V -V A -S S G Q V K F M A D K T D R G L E S R F L V P E A G -N -R R -
uvig_566094_CDS_0007 -L -D A V E Q -Q ----D E S S C C Y W K A K A A N A H G K I S A L N D V L D W I K E N I G E (109)
A+ A + L I +
AcrIC3 I -E V A L T -G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;