3D Structure for uvig_563334_CDS_0028 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.46 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_563334_CDS_0028 1 AcrIIA7 0.73 View Alignment uvig_563334_CDS_0028 M D F G R A I Q L L K V G Q R V Q R Q G W N G K N Q Y -I E L A -T N -I S Y K N -A ---N N ---E -I V N -V E -(60)
M FG A+ LK G V R GWNGK I + + E
AcrIIA7 M T F G Q A L E S L K R G H L V A R K G W N G K G -M F I F M R P E D S L P T N -M I V N Q V K S L P E S F K -R W -V
uvig_563334_CDS_0028 ---H -D A ----I -G -N K A I A F V G T S G -V Q -L G W L A S Q A D M L A E D W K I V E N (110)
H D + + G + GWLASQ DMLA DW IV
AcrIIA7 A N N H G D S E T D R -I K F T A Y L C M K A A D G T I -V N G W L A S Q T D M L A N D W V I V -E
uvig_563334_CDS_0028 2 AcrIIA4 0.56 View Alignment uvig_563334_CDS_0028 M D F G R A I Q L L K V -G Q R V Q R Q G W -N -G K N Q Y I E L A T N I S Y K N A N N E I V N V E H D A I G N K A I A (60)
M +I +K V +G + +Q I ++N + ++
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D S N S I T Q L I I R V N N ------D G N E Y V I S E S -E N E S I V E
uvig_563334_CDS_0028 F V G -T -S G V Q L G W L A S Q A D M L A E D --W K -I --V E N (95)
+ + N
AcrIIA4 K F I S A F K N G W N Q E Y E D E E E F Y N D M Q T I T L -K S E L N
uvig_563334_CDS_0028 3 AcrVIA3 0.52 View Alignment uvig_563334_CDS_0028 M D F G R A I -Q L -L K V G Q R V Q R Q G W N G K N -Q Y -I E L A T N I S Y K N A N N E I V N V E H D A I G N K A I (60)
M + L+ G+ ++ + +
AcrVIA3 M F -K E F L E -K C L R Y G N L Y I L E E T G D -R K -K V K R -I S K --R ---H G K V T -------E -A S V
uvig_563334_CDS_0028 A F V G T S --G V Q L -G W L A -S -Q A D M L A E -D ---W K I V E -N (99)
+ + ++ + S + +
AcrVIA3 L L F D S G T K R T T I N E I Y L N S Q G Y F I I R D Q K R L K L E K --F K
uvig_563334_CDS_0028 4 AcrIIA12 0.51 View Alignment uvig_563334_CDS_0028 M D -F ---G -R A I ---Q L L K -V -G Q R V Q R -Q G W -N -G -K -N Q Y I E L A T N I S Y -K N A N N E I V (60)
M +I +K + + N +QY +
AcrIIA12 M S K T M Y K -N D V I E L I K N A K T -N N E E L L F T S V E R N T R E A A T Q Y F R C P E -K -H V -S D A G V -Y
uvig_563334_CDS_0028 N V E H D A I G N K A I A F V G T S G V Q L G W L A S Q A -D M L A E D W K I V E N (102)
E + D N
AcrIIA12 Y G E D --F E F D G F E I F -E D D L I Y T R S ----Y -----D K E E -L N
uvig_563334_CDS_0028 5 AcrIF18 0.50 View Alignment uvig_563334_CDS_0028 M D F G R A I Q L L K V G Q R -V -Q R Q G -W -N G K N Q Y I E L A T N I S Y K -N -A N N E I V N V E H D A I G N K (60)
M + + + W G ++ N E V H
AcrIF18 M T T --I -K ---A A Y -I -S -K D Q N W N D G T T T --------Y W F D -V -N G E T F G V V H G -G E -S
uvig_563334_CDS_0028 A -I A F V G T S G V Q L G W L A S -Q A D M L A E D W K I V E N (93)
+ V G+ Q + +
AcrIF18 W N A K V V D C D G A P S D Q Y T V D Q F --N I -T E D M I A E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;