3D Structure for uvig_561351_CDS_0066 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.37 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_561351_CDS_0066 1 AcrIE1 0.71 View Alignment uvig_561351_CDS_0066 M N K I P M E ------L H E E -I V T E L Q Y K V E E L E R D V D D L N E E I A D N E Q A Y K E T I A D L E K K I L (60)
M K + + +L +EE+ + + + E + + +
AcrIE1 M E K K L S D A Q V A L V A A W R K -Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q --
uvig_561351_CDS_0066 E T L E N K K C K E -Y D E R -D E -N -Y -N -Y G I D V C I C H V E D L F K D L L N -K L G G K K D V E (114)
E + V + + + DV+
AcrIE1 --G -L E E -A E G A C R N I -D I -M -R -A -K W V E V C G E V N Q H G I R V Y G D -A I D R -D V D
uvig_561351_CDS_0066 2 AcrIE6 0.61 View Alignment uvig_561351_CDS_0066 M N K I P M E L H E E -I V -T -E -L Q Y K V -E E L E R -D V D D L N E E I A D N E Q -A Y K E T I A D -L -E K K (60)
M E + L D L + + +
AcrIE6 M -N N ---D -T E V L -E -Q -Q -I K A F E -L L A D E L K D R L P -T L E I L -S P M -Y T A V M V T -Y -D L
uvig_561351_CDS_0066 -I L E -T L -E N K K C K E Y D E R D E N Y N Y G I D V C I C H V E D -L F K D -L -L N K L G G K K D V E (115)
L I +E+ L K
AcrIE6 I -G K Q -L A ----------------S R R A E L I E I L E E Q -Y P G H -A -A D L S I K N L C P
uvig_561351_CDS_0066 3 AcrIIA19 0.60 View Alignment uvig_561351_CDS_0066 M N K I ---P M E L -H -E ----E ----I V -T -E L --------Q -Y K -V -E -E L E R D V D D L N E E (60)
M + E DL+E
AcrIIA19 M K -L I V E V E E T N -Y -K N L V N Y T K L T -N -E S -H N I L V N R L I S -E Y -I -T K P Y E L R L D L S E R
uvig_561351_CDS_0066 I -A D N E Q A Y K E T I A -D L -E K K I L E T L E -N K K C K E -Y ----D E R D E N Y N Y G I D V C I -C H V E (120)
K ++ K +L + E + + + +
AcrIIA19 Y S N R D L I E F K F M L I E Y -C -K E A L Q D I K E L A N S D E A -Y E T D E A F E A V F R Q L F E E V -I S N P D
uvig_561351_CDS_0066 D L F K D L -L N -K L G G K K D -V E (140)
+ K +
AcrIIA19 T V L K A -F H -S -Y T S F L E E N K
uvig_561351_CDS_0066 4 AcrIC3 0.58 View Alignment uvig_561351_CDS_0066 M N K I P M E L H E -E --I V T E L Q Y K V E E L E R D V D D L N -E -E I A D N E Q ---A Y K E T I A D L E -K K (60)
M+ + EL V V + E ++
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A -S S G Q V K F M A D -K T D R G -L E S R F L V P E A ---G -N R R
uvig_561351_CDS_0066 I L E T L E N K K C K E Y D E R D E N Y N Y G I D V C I C H V E D L F K -D L L -N K L G G K K -D V E (112)
I L + +++ +L + K
AcrIC3 I E V A L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D -A -E R A -Q I N --K A L E G
uvig_561351_CDS_0066 5 AcrIIA11 0.55 View Alignment uvig_561351_CDS_0066 M N K I P M E L H E -E ---------I V T ----------E L -Q -Y ----K -V -E -E L E R -D V D D L (60)
M L L
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R -E T Q I E A G W Y D W -F -C -D D K A -L -A -G R L A -K I W G I L
uvig_561351_CDS_0066 N E E I A D -N E Q A Y K E T I A D L E K -K I L E T -L E ---N ------K K C K -E -------------Y (120)
D Y+ + +
AcrIIA11 K G I T S D Y I L D N Y R V W F K N N C -P M V G P -L Y D D V R F E P L D E E Q -R D E L Y F G V A I D D K R R E K -
uvig_561351_CDS_0066 -----------------D E ---R ---D -E -N Y N -Y -G I ----------------D V C I -C (180)
+
AcrIIA11 K Y V I F T A R N D Y E N E C G F N N V R E V R Q F I N -G W -E D -E L -K N E E F Y K A R E K K R Q E M E E A -N N
uvig_561351_CDS_0066 H V E D L F K -D -L -L -N -K -L G G K K D -V E (207)
+ ++ L +
AcrIIA11 K F A E I M -Q -R -A -D -E -I L -W N -L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;