3D Structure for uvig_553374_CDS_0029 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.13 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_553374_CDS_0029 1 AcrIE6 0.72 View Alignment uvig_553374_CDS_0029 M N -S R V L A I Y A T D T V Q R R I K I L Q D V L P Q Y Q ------D ----A D A E I I K Q A L A L F S S D L A -(60)
MN ++ + L D LP+ + ++I LA +L+
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y -T A V M V T Y D L I G K Q L A S R R A E L I E
uvig_553374_CDS_0029 E L R R I A N ----G P E -I --E L (80)
L
AcrIE6 I L E E Q Y P G H A A D L S I K N L C P
uvig_553374_CDS_0029 2 AcrIIC4 0.58 View Alignment uvig_553374_CDS_0029 M -N -S R V L A I ------------------Y A T ----D T V Q R R I K I L Q D V L -P ---Q Y Q D -A (60)
M S A ++ + D Y+
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F -F K N E N -Y S K E -
uvig_553374_CDS_0029 -D A E -I I K Q A L A L F S S D L A E L R R I A N G P E I E L (92)
K A+ L + +A I
AcrIIC4 L A E -K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_553374_CDS_0029 3 AcrIE1 0.58 View Alignment uvig_553374_CDS_0029 M --N ---S R V L A I ------------------------Y A T D T V Q R R I K I L Q D V L P Q Y Q D A (60)
M V+++ +T++ + L +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q G L E
uvig_553374_CDS_0029 D A E I I K Q A L A L F S S D L A E L R R -I A ------N G P E -I -E -L (100)
+AE + + + +E+ + G +
AcrIE1 E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_553374_CDS_0029 4 AcrIF23 0.55 View Alignment uvig_553374_CDS_0029 M -----------------------------------------------------------(60)
M
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_553374_CDS_0029 -----------------------N S R V L A I Y A T D T V Q R R I K I L Q D V L P -Q Y Q D ---A D A E (120)
+ + + + ++ + ++
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W -I E N -R N D S A Q E I A
uvig_553374_CDS_0029 I I K Q A L A L F S S D L A E L R --------R I -A N G -P --E -I ---E L (163)
+ ++
AcrIF23 G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I -A A E Y N A -L T A R W G F
uvig_553374_CDS_0029 5 AcrIF25 0.53 View Alignment uvig_553374_CDS_0029 M -------------------------------------------N S ----R -V -L -A -I -(60)
M
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I -A -E -V -L -E
uvig_553374_CDS_0029 ----------------------Y A T ----------------D ----T ----V -Q R R I K -I (120)
D +
AcrIF25 E A A A M A R S L E D S P I F Y R N K L C A D G -I V T I Q Q Q A A R F S A A T D D A T R L D A A L W -A R E G Y -Q L
uvig_553374_CDS_0029 L Q D V L P Q Y -Q -D A ------D A -E -I I K Q A L A L -F -S -S ----D L A E L R R I A N G P E I --E L (180)
L+ LP A + A + + G
AcrIF25 L S S G L P D S Y -S G A V P N E G R T G W -V -T A S Q M A R L -F -G -G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;