3D Structure for uvig_549732_CDS_0013 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.47 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_549732_CDS_0013 1 AcrIE6 0.71 View Alignment uvig_549732_CDS_0013 M S V E E R H ---L L N K I ----R -F F E D -M L L R S -K ---D Y ----R Q Q E N I G K E L T V M R I R L Q (60)
M+ + + L Y + + IGK L R+ L
AcrIE6 M N N D T E V L E Q Q I K A F E L L A -D E L K -D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I
uvig_549732_CDS_0013 K L ----R -F N K ---M -R -T -G -A (83)
+ +
AcrIE6 E I L E E Q -Y P G H A A D -L S I K N L C P
uvig_549732_CDS_0013 2 AcrIF23 0.55 View Alignment uvig_549732_CDS_0013 M S V E E ---R -H ----L L ----------------------N K ------I ------------(60)
M+ +
AcrIF23 M T N F Q T W L -D -S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
uvig_549732_CDS_0013 -----------------------R ----F F E D -------M L L ----R S K -----D Y R Q Q E (120)
LL
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I A
uvig_549732_CDS_0013 N I G K E L T V M R I ---R L Q -K ---------L -R -F -N K M R T ---G --A (166)
+ + +
AcrIF23 G F V M Q Q K A L L A Q H R S A K A -A G Q A D K V A K -I -A -A E Y N A L T A R -W G F
uvig_549732_CDS_0013 3 AcrIIC4 0.52 View Alignment uvig_549732_CDS_0013 M S -V --E E R H ------L ------L ----N K -------I R -F F E D ----M L L -R S K -D Y R Q (60)
M +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E -Q F S S A R D F F -K N E N Y S K E L
uvig_549732_CDS_0013 Q E N I -G K E L T V M R I R L Q K L R F N K M R T --G A (90)
E ++ +LQK+ ++
AcrIIC4 A E K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_549732_CDS_0013 4 AcrIIA28 0.50 View Alignment uvig_549732_CDS_0013 M -S ----V E E R H ----L ----L -N K ----I R F F E D -M L L R S ---K D -Y R Q ----Q E N I G K (60)
M + + + F +
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K E -L F N S M H D F R S Q H A K E A R I P G W S -D K Y N K L E K K M L S
uvig_549732_CDS_0013 E L T V M R I -R -L Q K L ----R -F -N K M R -T ---G A (93)
+ L
AcrIIA28 D F E E V T G I -K Y D T L E S E L -I -W D N L S N K F L Y N S
uvig_549732_CDS_0013 5 AcrIE1 0.49 View Alignment uvig_549732_CDS_0013 M S ----V -E E R H -L L ----------N K -----------I ----R --------F F E D -M L L (60)
M L+ I +
AcrIE1 M E K K L S -D A Q V -A L V A A W R K Y P D L R E -S L E E A A S I L S L I V F Q A -E T L S D Q A N E L A -N Y I R
uvig_549732_CDS_0013 R S -K D Y R Q ---Q -E N I -G -K -E -L -T -V -M -R I -R L Q K ---L ----R -F N K M R T G -A (117)
R
AcrIE1 R -Q -G L E E A E G A C -R N I -D -I -M -R -A -K -W V -E V C G E V N Q H G I R V -Y G D A I D R D V D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;