3D Structure for uvig_549602_CDS_0079 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.98 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_549602_CDS_0079 1 AcrIE6 0.71 View Alignment uvig_549602_CDS_0079 M K L T L T L N E V S A C A M A L L S K A Q E A E E E A L G C E K L R C A S A A L F W Q K R A E L Y R K T F E A V K A Q (60)
M + + + A A E+ + + + +L K+ +A
AcrIE6 M N -N -D T E V L E Q Q I K A F E L L A D E L K D R L P T L -E I L S -P M Y T A V M V T Y D L I G K Q L A S R R A E
uvig_549602_CDS_0079 R A S W ----W E K -A -E -E ---K -N -A (85)
+ + K
AcrIE6 L I E I L E E Q Y P G H -A -A D L S I K N L C P
uvig_549602_CDS_0079 2 AcrIE1 0.66 View Alignment uvig_549602_CDS_0079 M -K -L T ---L T L ----N ----E -----------V -S -A -C -A -M -A -L -L -S -K -A -Q -E (60)
M K L+ + L +
AcrIE1 M E K K L S D A Q V A L V A A W -R K Y P D L R E S L E E A A S I -L -S -L -I -V -F -Q -A -E -T -L -S -D -
uvig_549602_CDS_0079 -A E E -E A L G C E K L R C A S A A L F W Q K R A E L Y R K T F E A V K A ----Q -R A S W W E K A E E K -N A (118)
+ + + A + +++ R + V + A ++
AcrIE1 Q -A N E L -A N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R V Y G D A I D R D V D
uvig_549602_CDS_0079 3 AcrIIC4 0.62 View Alignment uvig_549602_CDS_0079 M K -L T L T L ------N E -----------V S A C A M -A -L L S K A Q -E A E E E A L -G C E --K L R C (60)
MK + + + A A
AcrIIC4 M K I T S S N F A T I A T S E -N F A K L S V L P K N H R E P I K G -L -F K S A V E -Q F S S A R D F F K N E N ---
uvig_549602_CDS_0079 A S A A L F W Q K R A E -L Y -R K T F E A V K A Q R A S W W E K A E E K N A (99)
K + E + + EK
AcrIIC4 -Y S K E L A E K F N K E A -V N E A V E K L Q K -A I D L A E K Q G I Q -F
uvig_549602_CDS_0079 4 AcrIF23 0.59 View Alignment uvig_549602_CDS_0079 M K -L T L T L ---N E -----V S ---------A -------C A ---------M -----------(60)
M + L + A
AcrIF23 M T N F Q T W L D S A D -I P V Q Q N -G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
uvig_549602_CDS_0079 -----------------A L L S K A -Q -E ----A E ----E E A L G C E K L R C ---A -S A -A L -F (120)
+ + G + +
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V -Q -Q M N Q D Q A E M A C D P S G L -L T A A K F W I E N -R -N D -
uvig_549602_CDS_0079 W Q K R A E L Y R K T F E A V K A Q -----------R -A -S -W -W E K -A E -E K ----N -A (173)
+ + A+ AQ +
AcrIF23 S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V -A -K -I A A -E Y -N A -L T A R W G F
uvig_549602_CDS_0079 5 AcrIC3 0.55 View Alignment uvig_549602_CDS_0079 M K L T -L -----------T L N E V S A C A M ----A L L ----S K A -Q -------E -A E ----E E (60)
M ++ L V A + E
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M -A D K T D R G -L E S R F L V P E -A G -N R R I E V
uvig_549602_CDS_0079 A L G C E -K L -R C A S A A -L -F -W -Q -K R A E -L Y R -K T F E A V K A Q R A S W W E K A E E K -N A (116)
AL A A T +
AcrIC3 A L T --G --R D L E A A -N -A -L -F -S E L A -A S V -E A T -N E M Y R E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;