3D Structure for uvig_543877_CDS_0087 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.39 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_543877_CDS_0087 1 AcrIE1 0.70 View Alignment uvig_543877_CDS_0087 M E -K I K R V ----L ------T ---Q S E I Q E L R D L I E Y T D D D R T I E L F R K F H A T Y N M L A V F -(60)
ME K+ L + E+ ++ L N +
AcrIE1 M E K K L S -D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I -V F Q A E T L S D Q A N E L A N Y I R R Q G
uvig_543877_CDS_0087 Y R E K -K S E E R R T L Y F E T E L Q K A N E K I K -K L E A E I K K -I --K -S M (104)
E R + + + I
AcrIE1 L E E -A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R -D V D
uvig_543877_CDS_0087 2 AcrIC3 0.61 View Alignment uvig_543877_CDS_0087 M E K -I K R V ----L ---------T ---------Q -S E I Q E L R D L I E --Y T ----D D D R T -I (60)
M + + L R +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S ---R F -L V P E A G N R R I E V
uvig_543877_CDS_0087 E L -F R K F H A T Y -N -M L -A -V F -Y -R -E K -K -S E E R R T L Y F E T E L Q -K A -N -E -K I K -K -L (120)
L R +
AcrIC3 A L T G R ----D L E -A -A N -A -L F -S -E -L A -A -S V E ------A T N -E M -Y -R -E L D -A -E -
uvig_543877_CDS_0087 -E A E I K K I K S M (131)
K +
AcrIC3 R A Q I N K -A L E G
uvig_543877_CDS_0087 3 AcrIF23 0.56 View Alignment uvig_543877_CDS_0087 M E K I K R V -------L -----------------------------------T Q --------(60)
M +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_543877_CDS_0087 -S ------E ----I Q E L R D L I E -Y T -D ---D D ---R T -I E L F R -K F H A T Y N M L A V F Y R E K (120)
+ +R + L + E
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q -M N Q D Q A E M A C D -P S G L L -T A A K F W I E N R N D S A Q E I
uvig_543877_CDS_0087 K S E E R R T L Y F E T ----E L -Q -K A N E K I K K L E A E I K K I K -S --M (163)
+ +K+ K+ AE +
AcrIF23 A G F V M Q Q K A L L A Q H R S A -K A A G Q A D K V A K I A A E Y N A L T A R W G F
uvig_543877_CDS_0087 4 AcrIE6 0.55 View Alignment uvig_543877_CDS_0087 M E K I K R V L T Q S E I Q -E L R D -L I E Y T D D D R T I E -L F R K F H A T Y N M L A V F Y R E K K S E E R R T -(60)
M T + D + + M + +
AcrIE6 M N N D ----T E V L E -Q Q I -K A F E -L L A D -E L K D R -L P T L E I L S P M Y T A V M V T Y D L I G K Q L A
uvig_543877_CDS_0087 L Y F E T E L Q -K A N E K I K K L E A -E -I -K K I K S M (91)
EL + E A K +
AcrIE6 -S R R A E L I E I L E E Q Y P G H A A D L S -I K N L C -P
uvig_543877_CDS_0087 5 AcrIIA11 0.54 View Alignment uvig_543877_CDS_0087 M E -K I -K R V ----L ----------------T ----------Q S E I Q E L R D L I E Y T D D D R -(60)
M + + + ++ D
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C D D K A L A G R L A K I W G I L K G I T S D Y I
uvig_543877_CDS_0087 ---T I E L -F R ----K -F H A --------------T Y N M L -A V ---F Y R ---E K -------- (120)
F+ + L
AcrIIA11 L D N Y R V -W F K N N C P -M V G -P L Y D D V R F E P L D E E Q R D E L Y F -G V A ---I D D K -R R E K K Y V I
uvig_543877_CDS_0087 -----------------------K S E E R ---------R T L Y F E T E L ----Q -K -A -N -E - (180)
E +E
AcrIIA11 F T A R N D Y E N E C G F N N V R E V R Q F I N G W E D E L K N E E F Y K A R E K K R Q E M E E A N -N -K -F -A -E
uvig_543877_CDS_0087 K I K K L E A E I K K I K S M (195)
+++ + +K
AcrIIA11 I M Q R A D E I L W N L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;