3D Structure for uvig_529916_CDS_0029 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.76 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_529916_CDS_0029 1 AcrIE6 0.71 View Alignment uvig_529916_CDS_0029 M T K D I L D K A K E L E R D -I E S L R -I L I -K -E K E S G D G L C V S S S F P Y -N Y -G Q -S V R F Q K E L C (60)
M+ + + + L + + +S
AcrIE6 M N N -D T E V L E Q Q I K A F E -L L A D -E L K -D R L -P T L E I -L S -P M Y T A V -M -V T -Y D L I G K Q L
uvig_529916_CDS_0029 D W M K Q K -K S E Y -------E K E L --E -A --L (90)
+ +L
AcrIE6 A S R R A E L I E I L E E Q Y P G H A A D L S I -K N L C P
uvig_529916_CDS_0029 2 AcrIE1 0.62 View Alignment uvig_529916_CDS_0029 M T ---K D ----I -L -D -K -A -------K -E --------L -E R -D -I E -S -L -R I -L I K -E (60)
M D + L
AcrIE1 M E K K L S D A Q V A -L -V -A -A W R K Y P D L R -E -S L E E A A S I -L -S L -I V -F -Q -A -E T L -S D -
uvig_529916_CDS_0029 K E S -G D G L C V S S S ---F P Y -N Y -G Q S -V R F Q K -E L C D W M K Q K K S -E Y ----E -K E -L E A -(120)
+ + + + + ++
AcrIE1 Q A N E L A N Y I R R -Q G L E E A E G -A C -R N I -D I M R A -K W V E V C G E V N Q -H G I R V Y G D -A I D R D
uvig_529916_CDS_0029 -L (122)
AcrIE1 V D
uvig_529916_CDS_0029 3 AcrIF23 0.60 View Alignment uvig_529916_CDS_0029 M T --K D I L -D K ----------A K E ------------L E ----------------------(60)
MT L + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I -D L E T G I A Y D P S Y N Y -A A N T R R A S L S P R G I D A R A V A K T
uvig_529916_CDS_0029 ----------R ----D I E S L R I L I K E -K E ----S ----G D G -L C V -S S S F P -Y ----N Y - (120)
+E +R+ L F
AcrIF23 F G G R A L T G T A -R Q K E W A E K I R A E K V Q Q M -N Q D Q A E M A C D P S G L L T A A -K F W I E N R N D -S A
uvig_529916_CDS_0029 G Q -S V R F Q K E L C -------D --------W -M -K -Q -K -K -S -E -Y -E -K E L E A ---L (177)
Q + A
AcrIF23 -Q E -I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V -A -K -I -A -A -E -Y -N A L T -A R W G F
uvig_529916_CDS_0029 4 AcrIIC4 0.59 View Alignment uvig_529916_CDS_0029 M T -K -D I L D K ------A ---K -E ----L E -R D I E S L R I L I K -E K E -S G D G L C V S S -S F P Y (60)
M I L + S +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V -L P K N H -R E P I K G L F K S A V E -Q F S S A R D F F K N E N -Y S K
uvig_529916_CDS_0029 -N Y G Q S V -R -F Q K E L C D W M K Q K K S E Y E K E L E A L (93)
E+ + EK
AcrIIC4 E L A E K F N K -E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_529916_CDS_0029 5 AcrIIA28 0.55 View Alignment uvig_529916_CDS_0029 M T --K ---D -I -L D K A K E -L E R D I E S L R I L I K E K E -S G D G L C V S S S F P Y N Y G Q S V R F Q K E (60)
M + + + L ++ + + Y +
AcrIIA28 M K T I F T K K -Q -T E E L L N D I S I E K Q K E L F N S M H D F R S Q H A K E A R I P G W S D K Y N K L E K K M L S
uvig_529916_CDS_0029 L C D -W -M -K -Q K K S E Y ------E K E ----L E -A -L (95)
+ K +
AcrIIA28 D F E E -V -T -G I K Y D T L E S E L I W D N -L S N K F L Y -N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;