3D Structure for uvig_525394_CDS_0058 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 85.15 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_525394_CDS_0058 1 AcrIIA21 0.72 View Alignment uvig_525394_CDS_0058 M F E N D Y G R I M T D A K G K A K T N I S G K L Q D V V T I Y D V F I G A G T Y L A P E I A I H C S K T A T E V A Y Y (60)
M I + + + S V
AcrIIA21 M D Y D N E N ---------------------Y L I P K I L L -Q -----D D F Y S S L S A K D I L V Y A V
uvig_525394_CDS_0058 I L R H L G F ---N -------E T T I E F T A K E A I S S G L V N A K T P N R V R D A I K E L I D F G V M I A W K (120)
+ + + F + E++ + + D+ L + + +
AcrIIA21 L K D R Q I E A L E K G W I D T D G S I Y L N F K L I E L A K M F S C ---S R T T M I D V M Q R L E E V N L I E R E R
uvig_525394_CDS_0058 D I D K I K K Y N V E V N S H T Y L L N P L L I R R C S A R S Y K R N C E V T K D K F N N G K V V F I R E Q D A M V Y N (180)
+ Y L
AcrIIA21 -V --D -------V F Y G Y S L P ----------------------------------------
uvig_525394_CDS_0058 F S K -M V K L N L P N L E N V N L E I E L (202)
K E+
AcrIIA21 -Y K T -----Y ------I --N E V
uvig_525394_CDS_0058 2 AcrIA3 0.49 View Alignment uvig_525394_CDS_0058 M F E N D Y G R I M T D A K G -K -A -K T N I S G K L Q D V V -T I Y D V -F I G A -G T Y L A P E I A I H C S K T A (60)
M I
AcrIA3 M S F Y I M ----Y ----I -K -V -----------K E -----M -S E Q K --------Q I S L R S K -
uvig_525394_CDS_0058 T E V A Y Y I L R H -L G F N E T T I E -F T A K E A I S S G L V N A K T P -N R V R D A I K E L -I -D -F G V M I A (120)
AcrIA3 ----------Q --------K E ----L ----L -------Q ----R F ----F -E -I -A --E -
uvig_525394_CDS_0058 W K D I D K I K K Y N V E V N S H T Y L L N P L L I ---R --R -------C S A R S Y K R N C E V T K D K F N N G (180)
N PL + Y R + K
AcrIA3 --V D ---E ------N G D L C --I P L Y D S S G D L T L F K Q D S R K Y Q M Y A Y F R I L R L I K K Q I F F -
uvig_525394_CDS_0058 K V V F I R E Q D A M V Y N F S K M V K L N L P N -L E N V N L E I E L (216)
I+ V K + +++V +E
AcrIA3 ----I K V K -K -V K R D K K F L C M H S N -V I D Q V K S V L E S
uvig_525394_CDS_0058 3 AcrVA3 0.44 View Alignment uvig_525394_CDS_0058 M F E N D Y G R I M T D A K G K A K T N I S G K L Q D -V V -T -I Y D V F I G A G T Y L A P E I A -I -H -C -S K -(60)
M T I
AcrVA3 M V ------------------------G K S -K -I D W Q S I D W --T K T N A Q I -A -Q -E -C G -R
uvig_525394_CDS_0058 T A T E V A -Y Y I -L R H L G F N E T T I E F T A K E A -I S -S G L ----V N A K T P N R V -R D A I K E L I D F (120)
A + + + A +
AcrVA3 -A Y N T V C K -M R G K L G K S H Q G A -K S ----P R -K D -K G I S R P Q P H L N R L E Y Q A L A T A K A K A S
uvig_525394_CDS_0058 G V M I A W K D I D K -I -K K Y N -V E V N S H T Y L L N P L L I R R C S ---A -----R -S Y -K R N ---C -(180)
+ +T L + + + + +
AcrVA3 P K A G --R ----F -E -T --N -T K -A K T W T L K S P D N K T Y T F T N L M H F V R -T N -P H -L F D P -D
uvig_525394_CDS_0058 E V T -K D K -F -N -N G K V -V F I -R E Q D A M V Y N F S K M V K L --N L P N L E -N V N L -E I E L (235)
+ N V + + K K+ + ++L
AcrVA3 -D V V -W R T -K -S N -G V E W -C R -A S S G -L A L L A K R K K A P L S W K G W -R L I S L T K D N K
uvig_525394_CDS_0058 4 AcrIIA6 0.43 View Alignment uvig_525394_CDS_0058 M F E N D Y G R I M T D A K G K A K T N I S G K L Q D V V T I Y D V F I G A G T Y -L A P E I A I H C S K T A T E V A Y (60)
M I D ++ E + K ++
AcrIIA6 M -K ---------------------------I N D D I ---K E -L I L -E Y M S R Y F K F E N D F Y K
uvig_525394_CDS_0058 Y I L R H L G F N E T T I E -F T A K E A I S S G L -V -N -A K -T P N R V R D A I K E L I D F G V M I A W K -D -I (120)
+ + + + G K RV + L D +
AcrIIA6 L P G --I K ---F -T D A -N W Q K F K N G G -T D I -E -K M G A A R V N A M L D C L F D D F E L A M -I G -K -
uvig_525394_CDS_0058 D K -I K K Y N V -E V -N S H T -Y L L -N P L L I ---R R C S A R S -Y -K R N -C E -V T K D K F N N G K V V -(180)
+ + K +D G
AcrIIA6 -A Q -T N ---Y -Y N D N S -L K M -N -M P F Y T Y Y D M F K K Q Q L -L K -W L K -N N -R D D V I G G T G R M
uvig_525394_CDS_0058 -------F -I -----R E -------Q --D -A M V Y N F S K M ---V K -L ----N L P ----N -L E (240)
F +
AcrIIA6 Y T A S G N Y I A -N A Y L E V -A L E S S S L G S G S Y M L Q M R F K D Y S K G Q -E -P I P S G R Q N R L E -W I -
uvig_525394_CDS_0058 -N -V -N L E I E -L (252)
AcrIIA6 E -N -N --L E N I R
uvig_525394_CDS_0058 5 AcrVA2 0.43 View Alignment uvig_525394_CDS_0058 M F E N D Y G R I M T D A K G K A ---K T N -I S G -K L Q D V V -T I --Y D V F -I G ----A G T Y L A P E I -(60)
M + R M+ KA Q +F A +
AcrVA2 M H H T -I A R -M N A F N -K A F A N A K D C -Y K K -M Q A W H L L N K P K H A F F P M Q N T P A L D N G L A A -L
uvig_525394_CDS_0058 A -I H -C ------------------------------------------S -K T A T E V A -Y Y (120)
T
AcrVA2 -Y E -L -R G G K E D A H I L S I L S R L Y L Y G A W R N T L G I Y Q L D E E I I K D C K E L P D D T ---P -T S -
uvig_525394_CDS_0058 -I -L -R H L -G F N E T T I -E F T A K E A I S S G L V N A ---K T P N R V R D A I K E L I D -F G V M I A --- (180)
L + + ++ K + + + G+
AcrVA2 I -F -L N -L P D -W C V -Y V D I S S A Q I A ---T F D D G V A K H I K G F W A I Y D I V -E M N G I N H D V L D
uvig_525394_CDS_0058 -W K D -I D K I K K Y N V E V -N S H T Y L L N P L L -I R R --------------------------C - (240)
+ + +
AcrVA2 F V V -D T --D -------T -D D N V Y V P Q P F I L S S G Q S V A E V L D Y G A S L F D D D T S N T L I K G -L
uvig_525394_CDS_0058 ----S A ------R ------S Y -------K R N C E -V T ---K -D K F N N G K V V F I R E ------ (300)
R +
AcrVA2 L P Y L L -W L C V A E -P D I T Y K G L P V S R E E L T R P K -H S I N K K T G A F V T P S E P F I Y Q -I G E R L G
uvig_525394_CDS_0058 -----Q -------D A ----M ----------V Y --------N F S K M V K L -N L P -N L E N -V - (360)
+ P
AcrVA2 S E V R R Y Q S I I D G E Q K R N R P H T K R P H I R R G H W -H G Y W Q G T G Q A K E F R V -R W Q P A V -F -V N S
uvig_525394_CDS_0058 N L E -I E L (367)
AcrVA2 -G R V S -S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;