3D Structure for uvig_517015_CDS_0009 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 84.52 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_517015_CDS_0009 1 AcrVIA2 0.70 View Alignment uvig_517015_CDS_0009 M K K K S E K -R R G Y M Y R C L R C G G T Y D S N ---E -L T R T L Q Y R --G E Y Q G T A -A -Y E T E R S C P A (60)
M K K + ++ L GE + + SC
AcrVIA2 M W -K C K K C -G ---------C D R F Y Q D I T G -G I S E V L E M D K D G E V L D E I D D V E Y G D F S C A K
uvig_517015_CDS_0009 C G Y D V E Y C ---G E W S D D G ---Y D Y -D -E L L (90)
C W +
AcrVIA2 C D N S S S K I Q E I A Y W D E I N G K N K T -Y L S K D K
uvig_517015_CDS_0009 2 AcrIC8 0.47 View Alignment uvig_517015_CDS_0009 M K K K S E K ----R -R ---G Y -M Y R C -L R C -G G --T Y D S -N -E -L T R T L Q Y R G E -Y Q G T A A -(60)
M Y G + ++ +
AcrIC8 M Y -A I R -K I Q F -F Y G P T D K K S Y V G E E -A G G R R E L F K T R -A -E A Q A R I E D ---L -----E E
uvig_517015_CDS_0009 Y E T --E R -S -C P A C G Y D V E Y C G E W S D D G Y D Y D --E -L -L (99)
G + +
AcrIC8 -G -V Y Y L A -H N -E S G R P D Y K I V W V R G E A -Q F E H A R W M R G
uvig_517015_CDS_0009 3 AcrIF19 0.45 View Alignment uvig_517015_CDS_0009 M K K K -S E K R ------------R ----G -Y --M Y R -C L R -C G G T Y D S N E ------L -T R T L (60)
MK + D + TL
AcrIF19 M K P L H T M N Y D N N Q M S L V Y E S Y D E Y G F E Y S V K L K I S V R -D -Y R G I D V S A F N A F P E -W E D T L
uvig_517015_CDS_0009 Q Y R G E Y Q G T A A Y E T E R S C -P A C G Y D V -E Y C G E W S D D G Y -D Y D E L L (105)
R + E A D + +
AcrIF19 R M R -D -R V ---M S V E E I -E N A M I S R Y K S L F I A P P D -C -T Y E F D -I
uvig_517015_CDS_0009 4 AcrIIA33_Seq 0.44 View Alignment uvig_517015_CDS_0009 M K K K -S E -K -R R -G Y M Y R C L R C G G ------T Y D ---S N E L T R T -L -Q -Y R G E Y Q G T A A Y E (60)
M Y + +
AcrIIA33_Seq M E L N F V G Q -F D N G H D F Y D V E K F V D V N V E T G R L S D E D I I K V Y D A L -R -N -E --------H R
uvig_517015_CDS_0009 T E R S C P A C G Y D V E -Y -C G E -----W -------S D D -G -Y D Y -D ---E L L (109)
R G + E ++ D E L
AcrIIA33_Seq L R R G K G K Y G N L L -S -F A -E Y G D E D V L T D T T Y W Y E E D -I L P A Q D R L E E -L
uvig_517015_CDS_0009 5 AcrIC9 0.44 View Alignment uvig_517015_CDS_0009 M K K K S E K R R G Y M Y R C L R C -G G T Y -D --S N -E -L T R T L Q Y R G E Y Q G T A A Y E T E R S -C P A C G (60)
M K Y+ + + R + + A
AcrIC9 M E T K -M ---T S F Y K I T A Y N S Q A L Y F W G T D A -D V D R Y V D W L N R D R E I N V -Y A A E A I P E A E W
uvig_517015_CDS_0009 Y D V E Y C G E -W S D -D G Y D Y D -----E L L (87)
E + + D E +
AcrIC9 A Q Y E G R D D V L -S G E E C G W D D F M S A E -A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;