3D Structure for uvig_516875_CDS_0028 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.02 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_516875_CDS_0028 1 AcrIIA7 0.73 View Alignment uvig_516875_CDS_0028 M K T L D E K A A E Y A A S V V S C N K E A K E C E G L I Q T A Y V L G A M K G E L L G E E T G T F G Q A L E S L K R G (60)
M T + S+
AcrIIA7 M -T F G ----Q A L E S L K R ------------------------G ------------------
uvig_516875_CDS_0028 H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V K S L P E S F K R W V A N N H G D S E T D R I K F T A Y (120)
HLVARKGWNGKGMFIFMRPEDSLPTNMIVNQVKSLPESFKRWVANNHGDSETDRIKFTAY
AcrIIA7 H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V K S L P E S F K R W V A N N H G D S E T D R I K F T A Y
uvig_516875_CDS_0028 L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E (150)
LCMKAADGTIVNGWLASQTDMLANDWVIVE
AcrIIA7 L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
uvig_516875_CDS_0028 2 AcrIIA12 0.45 View Alignment uvig_516875_CDS_0028 M K T L D E K A A E Y A A S V V S C -N -K E A K E C E G L I Q T A Y V L G A -M -K G E L L G E E T G T F G Q A -L -(60)
M + +
AcrIIA12 M -S K T -M ----------Y K -N ------------------D -V -----I ------E -L I -K
uvig_516875_CDS_0028 E S -L K R G H L V A R -K G W -N -G -K G --M F I F M R P E D S L -P -T -N -M -I V N Q V K S L P E S F K R W (120)
++ N F
AcrIIA12 N -A K T N N E E L L F T S V E R N T R E A A T Q -Y -F R ----C -P -E -K -H -V -S D A G V --------Y
uvig_516875_CDS_0028 V -A N N H G D S E T -D R I K F T A Y L C M K A A D G T I V N G W -L A -S Q T D M L A N D W V I -V E (173)
F + + + + D +
AcrIIA12 Y G -E -------D --F E F D G -F E I -F -E ----D D -L -I Y T R S -Y ---D K E -E L N
uvig_516875_CDS_0028 3 AcrIC1 0.44 View Alignment uvig_516875_CDS_0028 M K T L D E K A A E Y A A S V V S C N K E -A K E C E G L I Q T A Y V -L -G A ---------M K G E L ------(60)
M +L A+ + + + +GE
AcrIC1 M N N L K K T A I T -----H ---D G V -F A Y K N T E T V I G -S V G R -N D I V M A I D A T H G E F N D K N F I
uvig_516875_CDS_0028 -L -------------------G -----------------E E -------T G -T -F G -Q -A L (120)
+ +
AcrIC1 I -Y A D T N G N P I Y L G Y A Y L D D N -N D A H I D L A V G A C N E D D D F D E K E I H E M I A E -Q -M E -L -A
uvig_516875_CDS_0028 -E S L -K R G H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q -V -K S -L -P E S F K R W V A N N H G (180)
G V + + P+
AcrIC1 K R Y -Q E L G D T V ------H G T T R L A F D D D G Y M T V R L ----D -Q Q -A -Y P D ----Y R P ----
uvig_516875_CDS_0028 -D S -E T D R I K F T A Y L C M K A A D G T I -V N G W L -A -------S -Q -T -D M -L A N D W V I V E (237)
+ + A G WL + +A DW
AcrIC1 E -N D -D -K H I M W R A -L A L T A T G K E L E V F W L V E D Y E D E E V N S -W -D F -D I A D D W R E -L
uvig_516875_CDS_0028 4 AcrIF21 0.44 View Alignment uvig_516875_CDS_0028 M K T L D E K A A E Y A A S V V S C N ---K E --A -K E ----C E -G -----L I Q -T -A Y V ----L -G A (60)
M ++ + ++ + +
AcrIF21 M T S I K T -I E Y K G N T L T -L Q K D S --D A D C I S Y E I L L R D -P I K H W V -G R -D -V Q I L N I -D S S
uvig_516875_CDS_0028 ---------M ----K G E L L G -E E ----T G -T F G Q A L E S L K R G H L V A R K G W N G K G M F I F M R (120)
E ++ + G +
AcrIF21 T S V D V F Y K K F S D S E L A S M M Q R E Y D D C F P L Q V T A T L E S V I E A G ------D -I N T -K W F V V N
uvig_516875_CDS_0028 P E D S L P T N M I V N Q V K S L P E S F K R W V A N N H G -D S E T D R -I -K -F -T A Y L C M K A A D G T I V N G (180)
+ G +
AcrIF21 D -----------E T ---G ----A L S G ----K -Y -G S -V -Y -T -E S G W Y -I C N E S G E K I E N
uvig_516875_CDS_0028 W -L ----A S Q T D M -L A ----N D -W V I V -E (209)
S + +
AcrIF21 K L T E N Q I S S I R V A M D R G D T A T Y S -W E F D D
uvig_516875_CDS_0028 5 AcrVIA3 0.43 View Alignment uvig_516875_CDS_0028 M K T L D E K A A -E Y -A -A -S V V S C N -K E A K E C E G L I Q T A Y V L G A M K G E L L G E E T G T F G Q A L E (60)
M +
AcrVIA3 M -F ----K -E F -L -E -K -C L ---R ------------------------------------
uvig_516875_CDS_0028 S L K R G H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V K S L P E S F K R W V A N N H G D S E T D R I (120)
G L + KR H ++
AcrVIA3 ---Y G N L Y I L E E ------------T --G -D ---R -------K K V K R I S K -R H -----G K V
uvig_516875_CDS_0028 K F T A Y L C M K A A -D --G T I V N G W L A S -Q T D M -L A -N D -W V I --V E (164)
+ T +N ++ Q + + +
AcrVIA3 T E A S -V L L F -D S G T K R T T I N E I Y L N S Q G Y F I I R D Q K R L K L E K F K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;