3D Structure for uvig_516775_CDS_0020 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.65 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_516775_CDS_0020 1 AcrIIA27 0.73 View Alignment uvig_516775_CDS_0020 M -K Y K I S Y R -I N E Y L I N R N Y E M L I G D N D H R I I T G E N E D D A V S K L R N M L N I K D T A S K --M -(60)
M I L L+ DN + N +A K+R + K M
AcrIIA27 M K T F N I I V S E S -A N L K -E H S S E L V -D N I I Y K V E A K N R R E A F K K A R E E Y S F S S -K W K F N M R
uvig_516775_CDS_0020 --Y ------E -I ----E I L D I E E R (84)
L +EE
AcrIIA27 D L T A I D N T H -R R A W G R R Y L R V E E A
uvig_516775_CDS_0020 2 AcrIE2 0.66 View Alignment uvig_516775_CDS_0020 M K Y -K I S Y R -I N E Y L I N R N Y E M L I G D N D H R I -I T -G E ----N -E -D -D -A V -S K L R N M L N (60)
M I + E A + L
AcrIE2 M N T Y L I D -P R -K -N N -D N S G E R F ------T -V -D A -V D I T A A A -K -S -A A -Q Q I L G E E F E
uvig_516775_CDS_0020 -I K D ---T A S -K M -Y -E I E I --------------------L D I E E R (106)
+ + E
AcrIE2 G L V -Y R E -T G E -S N -G S G M -F Q A Y H H L H G T N R T E T T V G Y P F H V M E L
uvig_516775_CDS_0020 3 AcrIC9 0.61 View Alignment uvig_516775_CDS_0020 M -K -Y K I S Y R I N E Y L I N R N Y E M L I G D N D H R I I T G E N E D D A V S K L R N M L N I K D T A S K M Y E -(60)
M Y+I+ + + ++ D+ LN Y
AcrIC9 M E T K M T S F Y K I T -A ----Y ------N S Q A -L Y F W G T D A D V D R Y -V D W L N R D R -E I N V Y A A
uvig_516775_CDS_0020 I E I L D I ---------------E E ----------R (94)
I + EE
AcrIC9 E A I P E -A E W A Q Y E G R D D V L S G E E C G W D D F M S A E A
uvig_516775_CDS_0020 4 AcrIC8 0.57 View Alignment uvig_516775_CDS_0020 M K Y K I S Y R I N E Y L I N -R N Y E M L I -G D N -D H R I I T G E N E D D A V S K L R N M L N ---I -K D -T A (60)
M I +I+ + + + + +A ++
AcrIC8 M Y -A I R -K I Q F -F Y G P T D K K S Y V G E E A G G R -R E L F K T R A E A Q A R I E D L E E G V Y Y L A H N E S
uvig_516775_CDS_0020 S K M Y --E I E -I -L D I --E E ------R (86)
+ I E
AcrIC8 G R P -D Y K I V W -V R G E A Q F E H A R W M R G
uvig_516775_CDS_0020 5 AcrIF19 0.57 View Alignment uvig_516775_CDS_0020 M -----------K Y K I S Y R I N -E -Y --L I N R N -Y E M L I G D N -D H R I I T G E ----------(60)
M + Y E + + D R I
AcrIF19 M K P L H T M N Y D N N Q M S L V Y E S Y D E Y G F E -Y S V K L K I S V ----R D Y R G I D V S A F N A F P E W E D
uvig_516775_CDS_0020 ------N E -D D A V S K L R N M L -N I K D T A S K -M Y E I E I -L D -I -E -E R (106)
V + N + + + E +
AcrIF19 T L R M R D -R V M -S V E E I E N A M I S -R Y --K S L -F I A P P D -C T -Y E F D I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;