3D Structure for uvig_513507_CDS_0012 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.12 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_513507_CDS_0012 1 AcrIB1 0.86 View Alignment uvig_513507_CDS_0012 M I D Y K I V P L G E I L S K E Y ---E E Q -L I E E S F K K F S C -Q R E S D L E N F L L H K A I P Y E K T N Y G K (60)
M L +L+ Y + + +F+ +D+E FL KAI EK++
AcrIB1 M E S K N ---L R K L L N E -Y E E I D I N E -M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S
uvig_513507_CDS_0012 T Y L F I D T D R L K K G D F D I I A Y F T I A Q K -S L D I ----S -S L S K K K K R K L L G E Y P G -R D S L S S (120)
TY+ D +I+ YFTIA++ + LSK +KL +
AcrIB1 T Y V V F S ---E ---D N E I L G Y F T I A N R S L V I P K E N F -G I L S K T Q Q K K L G N S A A I L K N G D L M
uvig_513507_CDS_0012 V P T F L I G Q L G R C D R Y K -G D D L T G Q Q I L N E T Y H A I S L A A R V V G G N L I V L E C -R E H M F H K F Y (180)
+FL+GQLG+ +TG +L+ Y + + ++ I LEC E FY
AcrIB1 T S S F L L G Q L G K N Y S D D I E N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S F Y
uvig_513507_CDS_0012 E E Q G F I K L Y D E L N E E G L Y T L Y K K I D F R E Y W E H (212)
GF L +EEGL +
AcrIB1 Q N F G F K M L E S L T S E E G L K V M I M -E ----L --K
uvig_513507_CDS_0012 2 AcrVA5 0.56 View Alignment uvig_513507_CDS_0012 M I D Y K I V P L G E I L S K E Y E E Q L I E E S F K K F S C Q R E S D L E N F L L H K A I P Y E K T N Y G K T Y L F I (60)
M + G +
AcrVA5 M -K I E L --S G G Y I C Y S -I ------------E ---------------------E -------
uvig_513507_CDS_0012 D T D R L K K G D F D I I A Y F T I A Q K S L D I S S L S K K K K R K L L G E Y P G R D S L S S V P T F L I G Q L G R C (120)
I +
AcrVA5 -------------------------------------------------D E V T I D M V E V T
uvig_513507_CDS_0012 D R Y K -G D D L T G Q Q I L N E T -Y -H A I S L A A R -V V G G N L I V L E C -R ------E H M F H K F Y E E Q (180)
G+ + +AR VG I L FY +
AcrVA5 T ---K -R Q G I G S ----Q L I -D -M V K D V A R E -V G -L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N
uvig_513507_CDS_0012 G F I K L Y D E L N E E G L Y T L Y K K I D F R E Y W E H (209)
F D +
AcrVA5 D F E Y D P D -D -V -D G ----R L M -R --W --S
uvig_513507_CDS_0012 3 AcrVIA1_Lse 0.39 View Alignment uvig_513507_CDS_0012 M I D --Y K I V P L G E I L S K E Y E E Q L I E E S ----F K K F S C -Q R E S D L E N F L L H K A -I -P -Y E K (60)
MI + G I ++E KK + + + K
AcrVIA1_Lse M I Y Y I K D L K V K G K I F E N L M N K E A V E G -L I T F L K K A E F E I Y S R E N Y S K Y N K W -F -E -M W -K
uvig_513507_CDS_0012 T N Y G K T Y L F I D T D R L K K G D F D I I A -Y F T -I A Q ---K S L D I S S L S K K K K R K L L G E Y P G R D S (120)
+ + I S+ L + P
AcrVIA1_Lse S P T S S L V F W -K ------N -Y S F R C H L L F V I E K D G E C L G I P A S V F E S V L Q I Y L A D -P F A P -
uvig_513507_CDS_0012 ----L S S ---------V P -T F L -I G Q L G R C D R Y K G D D L T G Q Q I L N E T Y H A I S L A A R V V G G (180)
L + + ++ + H
AcrVIA1_Lse D T K E L F -V E V C N L Y E C L A D -V T V V E H F E -A -----E E S ----A W H K L T H N E ----T E -V S
uvig_513507_CDS_0012 N L I V L E C R -------E H M F H K F Y E E -Q G F ----I K L Y D E L ----N -------E -------(240)
+ F + +
AcrVIA1_Lse K R V Y -S K D D D E L L K Y I P E F L D T I A T N K K -S Q K Y N Q I Q G K I Q E I N K E I A T L Y E -S S E D Y I F
uvig_513507_CDS_0012 -E G -------L Y T -L -Y K K I ----D F R -E Y W E H (273)
E + +
AcrVIA1_Lse T E Y V S N L Y R E S A K L -E Q H --S K Q I L -K E -E L -N
uvig_513507_CDS_0012 4 AcrVA4 0.38 View Alignment uvig_513507_CDS_0012 M I D Y K I V P L G E I L S K E Y E E Q L -I E E S F K K F S C Q R E S D L E N F L L H K A I P Y E K -T N -Y G K T Y (60)
M I ++ + + + +
AcrVA4 M -Y -E I K L N D T L I H Q T D D R V -N A F V A Y R Y L L R R ---------------G D -L P K C E N I A R
uvig_513507_CDS_0012 L F I D T D R L K K G D -F -D I I A Y F T I ---A -Q K S L D I S S L -S K K K K R K L -L G E Y P G -R D S ---(120)
++ +I ++ Q + + + E +
AcrVA4 M Y Y -D G K V -I K -T -D -V I D H D S V H S D -E Q A K V S N N D I I K ----M A -I S -E L G -V N -N F K S
uvig_513507_CDS_0012 -----L S S V P T F L I G ------Q L G -R -C D R Y -K G D D ----L T G Q ---------Q I L -N E T (180)
+ I +
AcrVA4 L I K K Q G Y P F S N G H I N S W F T D D P --V -K S K T M H N D E M Y L V V Q A L I R A C I I K E I D L -Y T E Q -
uvig_513507_CDS_0012 -Y H A I S L A A R V -V -G G N L I V L E C -R ------E H M F H K F Y E E Q G F -I K -L Y --D ------- (240)
Y +I + +V + EQ D
AcrVA4 L Y N I I K S L P Y -D -K -R P N V V Y S D Q P L D P N N L D L S E P E L W A E Q V G E C M R Y A H N D Q P C F Y I G
uvig_513507_CDS_0012 -E L N -E ---E G -------L -Y T L Y K K I -D F ---R -E -Y -W E H (282)
E + + +
AcrVA4 S T -K R E L R V N Y I V P V I G V -R D E I E R V -M T L E E V -R -N -L H -K
uvig_513507_CDS_0012 5 AcrIF16 0.38 View Alignment uvig_513507_CDS_0012 M I D Y K -I V P L G E I L S K E -Y -E E Q L I E E -S -F K K -F S C Q R E S D L E N F L L H K A -I P -Y E K -T (60)
M L + ++ L+ +L A +
AcrIF16 M S L S D K K E Q K E A Y L D A L R -I A P L D R G -V -L K R -I -H A V N D N T L D K W L Y -V A D R Y P T F R A C
uvig_513507_CDS_0012 N Y G K T Y L F I D T D -R L K K --G D F D I I A Y F T I A Q K S L D I S S L S K K K K R K L L -G -E Y P G R D S L (120)
F + + + YP
AcrIF16 -W E L W -M F -Q R K R -R V -L I -S R K L H -V L I N R --------S T N R T I E A F E K -T -Y P P ----
uvig_513507_CDS_0012 S -S V P T F L I G Q L G R C D R Y K -G D D L T G Q Q I L N E T Y H A I S L A A R V V G G N L I V L E C --R ----(180)
++G R N ++
AcrIF16 E E ---R -V V G K S Y R D L --V T ------E ----K G E -R ---S ----A -N M Y I I N G E V V G A K D
uvig_513507_CDS_0012 -----E ----H -M F -H K F Y E E Q G F I K L Y D E L N E -E G L Y T L Y K K I D F R E Y W E H (232)
G D+++ + +
AcrIF16 A S I L L G Y S S Y -N T -L Y A K M K R L G I Q P G -D D I S H L K P E ---K R -G R K K -E -C S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;