3D Structure for uvig_51106_CDS_0028 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.58 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_51106_CDS_0028 1 AcrIE1 0.70 View Alignment uvig_51106_CDS_0028 V K E N N I E E A I E R L E Y I D R A Y S C N N Y -Y S V W D L K C I E -T L L S D Y K R V F K E N E R Y Q K S D Y E T (60)
+ +A + A +
AcrIE1 M E -K K L S D A Q ---V A L V A A W R K Y P -D -L -------R E ----------------------S
uvig_51106_CDS_0028 I C L -E N K -E L K -E -I N E R L E S E N Q E F -L -Y K Y G N V L K E N K E L N E -K W -D -K -D T H K L Q N D (120)
+ L I L N
AcrIE1 L E -E A A -S I L -S -L I V F --------Q A -E ---------------T L -S -D -Q -A N E L A N Y
uvig_51106_CDS_0028 L -D I A N A K I I E L -L -K -E N E E L K D K Y A T F V K M S S E -V I A N S I -P K Q K V K D K I Q E L L E G R K (180)
+ E + A +V V + ++++
AcrIE1 I R R Q G L E ---E -A -E -G A C R N I D I M R A K W V E V C G -E V -N Q H G I ------R V Y G D A I D R D V
uvig_51106_CDS_0028 N E (182)
+
AcrIE1 -D
uvig_51106_CDS_0028 2 AcrIC3 0.58 View Alignment uvig_51106_CDS_0028 V K E N N I E E A I E R L E Y I D R A Y S C -N -N Y Y S V W D L -K C I E T L L S D -Y K R V F K E N E R Y Q K S D Y (60)
++ V + K
AcrIC3 M S -I Q V T S T ---N G ------R -T -V -N L E ----I ----E ----L -G S V V A S S G Q -V K F M A
uvig_51106_CDS_0028 -E T I C L E N K -E L K E I N E -R L E S E N Q E F L -Y K Y G N V L K E N K E L N E K W D K -D T -H K L Q N D L D (120)
E +
AcrIC3 D -K T ----D R G -L E S R -F --L V P -----E ---A -------G N R ----R I -E V A ----L --
uvig_51106_CDS_0028 I A N A K I I E L L K E -N -E -E -L -K -D K Y A T F V K M S S E V I A -N S I P K Q K V K D K I Q E L L E G R K N (180)
L A V + + +
AcrIC3 -T G ----R D L E A A -N -A -L -F -S -E L A A S V E A T ---N -E ---M Y R E L D A E R A Q I N K A L -E
uvig_51106_CDS_0028 E (181)
AcrIC3 G
uvig_51106_CDS_0028 3 AcrIIA19 0.58 View Alignment uvig_51106_CDS_0028 V K E N N I E E A I E R L E Y I D R A Y -S -C -N -N Y Y S V W D L K C I E T L L S D Y K R V F K E N E R Y Q K S D Y (60)
K I E+ E + + + L+S+Y
AcrIIA19 M K -L -I V E V E ---E T N Y K N L V -N -Y -T K L T N E S H N I L V N R L I S E Y I T -------K P Y E --
uvig_51106_CDS_0028 E T -I C L E N K E L K E -I N E -R L E S E N Q E F L Y K Y G N V L K E N K E L N E K W -D -K D -T -H -K L Q -N (120)
++E ++ E +
AcrIIA19 --L -R -------L D L S E R --------Y ------S N R D L I E F K F M L I -E -Y C -K -E -A L Q -
uvig_51106_CDS_0028 -D L D I A N A K I I E L L K E N E E L -K D K Y A T F -V K -M S S E V I A N -S I P K Q K V K D K I Q E L L E G R K (180)
+ + E + EVI K+ + LE
AcrIIA19 D I K E -L A N S ----D E A Y E T -D -E A F E A V F R -Q L F E E V I S -N P D T V L K A F H S Y T S F L E E --
uvig_51106_CDS_0028 N E (182)
N
AcrIIA19 N K
uvig_51106_CDS_0028 4 AcrIIA11 0.57 View Alignment uvig_51106_CDS_0028 V K E N N I E E A I ---E ------R L -E Y -I D -R A Y S -------C N -N Y -Y S -V -W -D L -K C I E (60)
+ ++ + A L K
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R -E T Q -I E A --G W Y D W F C D -D K -A L -A -G -R -L A K I W G
uvig_51106_CDS_0028 T L L S D Y K -R -V -F K E N E R Y Q K S D Y E T I C L ---------E N K E L K E --I N E -R L E S -----(120)
L K+ + E + + +
AcrIIA11 I L K G I T S D -Y -I L D N Y R V W F K N N C P M V G P L Y D D V R F E P L D E E Q R -D E L Y -F G V A -I D D K R
uvig_51106_CDS_0028 --E N ----Q ---E F L Y ---K -Y -G N V L K E N K E L N E K W D K D T H K L Q N D L D I A N A K I I E L L K (180)
+ + N ++E + W L N
AcrIIA11 R E K K Y V I F T A R N D Y --E N E C G -F -N N V R E V R Q F I N G W ---E D E L K N ------E ------E
uvig_51106_CDS_0028 E N E E L K D K Y A T F -V K -M S -S E -V -I A N S I P -K Q K V K D K I Q E L L E G R K N E (229)
Y + + + ++ E+L K +
AcrIIA11 -------F Y K A -R E -K -K R Q -E -M E E A N N K F -A E I M Q R A D E I L W N L K E D
uvig_51106_CDS_0028 5 AcrIE6 0.56 View Alignment uvig_51106_CDS_0028 V K E N N I E E A I E R L E Y I D R A Y S C N N Y Y S V W D L K C I E T L L S D Y K -R -V -F K E N E -R Y Q K S D Y (60)
N E + E K
AcrIE6 M -N N D T E V L -E ------Q -------Q ---------------I K -A -F E -L L A D -E L K D R L
uvig_51106_CDS_0028 E T I C L E N K E L K E I N E -R -L E S E N Q E F L Y K Y G N V L K E N K E L N E K W D K D T H K L Q N D L D I A N A (120)
T+ E + ++ +
AcrIE6 P T L -----------E I -L ---------------------------------S P M Y T A V M V
uvig_51106_CDS_0028 K I I E L -L K E N E E L K D K Y A T F V K M S S -E V I A N S I P K Q K V K D K I Q E L L E -G R K N -E (174)
+ L + A + + +L
AcrIE6 T Y D L I G ----K Q L A S R R A E L I E I L E E -Q Y P G H A ---------A D L S -I K N L -C P
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;