3D Structure for uvig_504978_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.93 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_504978_CDS_0004 1 AcrIIA22 0.73 View Alignment uvig_504978_CDS_0004 M I V E D T K D L V E T A D Y V I I E A V L V D D G L R Y K Q L S V G I K A K N G D I I R I I P I S T M L M (54)
M+VE+T+DL+ETAD V+IEA+LVDDGLRY+QLSVGIK NGDIIRI+PIST L
AcrIIA22 M V V E E T R D L A E T A D C V V I E A I L V D D G L R Y R Q L S V G I K D E N G D I I R I V P I S T V L I
uvig_504978_CDS_0004 2 AcrIF18 0.56 View Alignment uvig_504978_CDS_0004 M I V E D T K D L V E T A D Y V I I E A V L V D D -G -L R Y K Q L S V G I K A K N G D I I R I I -P ---------(60)
M I A + D + NG+ ++
AcrIF18 M T -------------T I K A A Y I S K D Q N W N D G T -T T -Y W F D V N G E T F G V V H G G E S W N A K V V
uvig_504978_CDS_0004 ----------------I S -T M L -M (84)
I+ M+
AcrIF18 D C D G A P S D Q Y T V D Q F N I T E D M I A E
uvig_504978_CDS_0004 3 AcrVIB1 0.54 View Alignment uvig_504978_CDS_0004 M I V E -D -------T K -D L V E ----------------T ---------A --D Y V I -I E A -V L (60)
M L+ +YV I +
AcrVIB1 M K D L D L S K L K G E E I A Q W L L N N K K A T A I Q L S S E R T D T D D G F M H I L V H -K D E Y V E I I Y S Y L K
uvig_504978_CDS_0004 V D D -G L R Y K Q L S V G I K A K N -----------------------G D I I R -I -I -P I S --T M L (120)
+D+ + + ++ + I+ + T L
AcrVIB1 I D E D D V -M Q N F T I -Y S K R -W G N I D N S Y F E L Q T F E G E I F T G E S D K I L C G -V -L S L G D L T T L
uvig_504978_CDS_0004 M (121)
AcrVIB1 K
uvig_504978_CDS_0004 4 AcrIIA4 0.53 View Alignment uvig_504978_CDS_0004 M I V E D T K -D L V E T A D Y V I I E A V L --------V ----D D --------G ----L R ----Y K Q (60)
M + D ++ V + +
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D S N S I T Q L I I R V N N --D G N E Y V I S E S E N E S I V E K F I S -
uvig_504978_CDS_0004 -L S V G I K A K ------N G -D I I R I I P -I S T M L M (92)
G D I + L
AcrIIA4 A F K N G W N Q E Y E D E E E F Y N D M Q T I T -L -K S E L N
uvig_504978_CDS_0004 5 AcrVIA3 0.52 View Alignment uvig_504978_CDS_0004 M I V E D T K D L V E T -A D Y V I ---------------------I E A -V -L -V D D G L R Y K Q L S V G (60)
M + + I D G + +++
AcrVIA3 M F K -E F L E K C L R Y G N L Y I L E E T G D R K K V K R I S K R H G K V T E A S V -L -L F D S G T K R T T I N E I
uvig_504978_CDS_0004 I K A K N G D I I R I I -P --I S T M --L M (84)
II
AcrVIA3 Y L N S --Q G Y F I I R D Q K R L K L E K F K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;