3D Structure for uvig_502434_CDS_0319 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.70 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_502434_CDS_0319 1 AcrIIA7 0.71 View Alignment uvig_502434_CDS_0319 M K I Q E M I E A I K N G K K V R R E C W S G D K F L Y Y V P -S A S Y P A R T G I -----------E -N -S -I (60)
M +E +K G+ V R W+G S + I
AcrIIA7 M T F G Q A L E S L K R G H L V A R K G W N G K G M F I F M R P E D S L -P T N M I V N Q V K S L P E S F -K -R -W -
uvig_502434_CDS_0319 -A D K -----D -G K V L Y K E Y I A I R C K D G -D V G F Y T P T Q C D V L A E D W K V I V E (110)
A + ++ Y+ + DG V +Q D LA DW ++ E
AcrIIA7 V A N -N H G D S E T D R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V -E
uvig_502434_CDS_0319 2 AcrIF18 0.60 View Alignment uvig_502434_CDS_0319 M K I Q E M I E A I K N G K K V R R E C -W S G D K F L Y Y V P S A S Y P A R T G I E N S I A D K D G K V L Y K E -Y I (60)
M A+ + + W+ + D E
AcrIF18 M T T --I K -A A Y ---I S K -D Q N W N D G T -------T T ---------Y W F D V N -----G E T -F
uvig_502434_CDS_0319 A -I R C K D G D V G F -Y T P T -Q C ----D V L A E ----D -W K V I V E (101)
++ ++ I+E
AcrIF18 G V V H -G G E S W N -A K V V D C D G A P S D Q Y T V D Q F N I -T E D M I A E
uvig_502434_CDS_0319 3 AcrIIA12 0.57 View Alignment uvig_502434_CDS_0319 M K -I ---Q -E M ---I E A I K -N -G K K V R R -E C W -S G -D -K -F L Y Y V P S A S Y P A R T G I E -N S (60)
M + I +K + + + Y +
AcrIIA12 M S K T M Y K -N D V I E L I K N A K T -N N E E L L F T S V E R N T R E A -A T Q Y F R C P E K H V ----S D A G V
uvig_502434_CDS_0319 I A D K D G K V L Y -K -E -Y -I A I R C K D G D -V G F Y -T -P T Q C D V L A E D W K -V I V E (111)
D + D D D K +
AcrIIA12 Y Y G E D F --E -F -D -G -F E I -F -E D -D L -I Y T R -S ---Y -----D -K E -E L N
uvig_502434_CDS_0319 4 AcrVIA3 0.56 View Alignment uvig_502434_CDS_0319 M K I Q E M -I E A I K N G K K V R R E C W S G D K F L Y Y V P --S A -S Y P A R T G I E N S I -A D K D G K V -L Y (60)
M E ++ G E +GD+ + T + D K
AcrVIA3 M F K -E F L E K C L R Y G N L Y I L E E -T G D R K K V K R I S K --R H G K V -T E A S V L -L F D S G T K R T T I
uvig_502434_CDS_0319 K E Y I A I R C K D G D V G F Y T P T Q C D V L A E D W K V I V -E (94)
E + G +
AcrVIA3 N E I Y -L -N S Q G Y F I I R D -Q K R L ---K L E -K --F K
uvig_502434_CDS_0319 5 AcrIIA4 0.55 View Alignment uvig_502434_CDS_0319 M K I Q E M I E A I K N -G K K V R R E C W S G D K F L Y Y V P --S A S Y P A R -T -G I E -N S I A D K D G K V L Y (60)
M I++ I IKN V+ + I + + +
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D S N S ---I --T Q L -I I R V N N -D -G N E Y V I S E S E N E S I V
uvig_502434_CDS_0319 --------K -E -Y I A I R C K D G D V G F Y T -P T Q C D V L A E D -W -K -V I V E (107)
+ + FY+ Q + +
AcrIIA4 E K F I S A F K -N -G W N Q -E -Y E D E E E F Y N D -M Q T -I T ---L -K -S -E L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;