3D Structure for uvig_501003_CDS_0065 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.94 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_501003_CDS_0065 1 AcrIB9 0.72 View Alignment uvig_501003_CDS_0065 M N N S V E T K K E E V R K N I K N A F E S A T K K I K D I I S V C -P -D W E V E G I -D V ----G Y K S L I A -H (60)
MN + + +NIK + E + + + D E + D S I
AcrIB9 M N K F A F E N D K Y L E R N I K A V V E K I A R D F N L H L K S K Y S K D C E F T V V A D N S F D N I E N S T I F L E
uvig_501003_CDS_0065 L N L K -G V --G R -D M M V I R Y Q A K V G N F Q E E S F N T N -V A --S F G S F D L L E T N E N L ---K Y Y -(120)
+ G + Y E V + T + KY
AcrIB9 I K R N D G K A C Q -D H H I Y A E Y E C D E D --D N E Y I A -L T V K F Y G S S A S N Q I N T V Q G I K S S K Y A S
uvig_501003_CDS_0065 T A V -G D I L N H K -------D M -L -S -L L -K -E T --------M -V F -F -A N K -I --------(180)
+ + + A
AcrIB9 -C I V -S D T D -N Q L S K S I H E L N -L -K -K E -K -E Q Q E A W N K K -E A -E -Y A R -K K Q A Y V S Q S Q
uvig_501003_CDS_0065 A -------E L R K E ----Y -D -K -L -D -K E D (210)
+L +
AcrIB9 R E K Y E D I F D L P F D F Y D Y -I -D -K K E Q G L -I
uvig_501003_CDS_0065 2 AcrIB2 0.61 View Alignment uvig_501003_CDS_0065 N /A (3)
N/A
AcrIB2 N /A
uvig_501003_CDS_0065 3 AcrIIA5 0.59 View Alignment uvig_501003_CDS_0065 M N N S V E T ---K --K --E E -V -R K -N -I K N A F E S A T K K I K D I I S V C P D W E V E G I D V G Y K S L (60)
M K + + ++ + W +
AcrIIA5 M A Y G K S R Y N S -Y R K R S F N R -S -N K -Q -R R E Y A Q E M D R L E K A F E N L D G W Y L S S ---M K -D S
uvig_501003_CDS_0065 I A H L N L K G V G R D M M V I R Y Q A K V G N F Q E E S F -N T N V A S F G S -F D L L E T -N E -N L -K Y Y T A V (120)
A G+ + + + + V
AcrIIA5 -A Y K D -F --G K Y E I R L S N H S A D N K Y H D L E -N ----G ---R L -I --V N I K -A -S K --L N F V
uvig_501003_CDS_0065 G D -I L N H -K D M L S L L K E T M V -F F -A -N K ---I A E L R K ------E ---Y D K L D K E -D (176)
D + L + E K + + K KE
AcrIIA5 -D I -I --E -N K L D K I I E K I D K L -D -L D K Y R F -I N A T N L E H D I K C Y Y K G F K T K K E V I
uvig_501003_CDS_0065 4 AcrIF4 0.59 View Alignment uvig_501003_CDS_0065 M N N S V E T K K E E V R K N I K N A F E S A T K K I K D I I S V C P -D W E V E G I D V G Y K S L I A H L N L K G V G (60)
M + K ++ + ++ +
AcrIF4 M M T I S ---K T D I D C Y ---------------L ---Q T -------------Y V V I D P V ---S
uvig_501003_CDS_0065 R D M M V I R Y -Q A K -V G N F Q E E S F N T N V A S F G S F D L L E T N E N L K Y Y T A -V G -D I L N H K D M L S (120)
+ G G + +E Y + + K+
AcrIF4 N G W Q W G I D E N -G V G G A -L H ------H ---G R V E M V E G E N --G Y F G L R G -A T H P T E K E A M A
uvig_501003_CDS_0065 L L K E T M V F F A N K I ----A E L R K -E -Y D K L D K E D (153)
++ + + +K
AcrIF4 A A L G Y L W K C R Q D L V A I A R N D A -I -E A E K Y R A K A
uvig_501003_CDS_0065 5 AcrIC3 0.58 View Alignment uvig_501003_CDS_0065 M N N S V E T K K E E V R K N I K N A F E S A T K K I K D I I S V C P -D W E V E G I D V G Y K S L I A H L N L K G V G (60)
M+ +V + ++ V + ++ + K
AcrIC3 M S I Q V T S T ---N G ----R T V -N L ---E ----I E --L -G S V ---V A S S G Q V K F M A D -K T -D
uvig_501003_CDS_0065 R D M M V I -R Y Q A K V G N F Q E E S F N T N V A S F G S F D L L E T N E -N -L K Y Y T A V G -D I L N H K D M L S (120)
R + E + G D+ S
AcrIC3 R G L -E S R F -L V --P ----E A -----------------G N -R R I E V A L T G R D L E A A N A L F S
uvig_501003_CDS_0065 L L ----K -E T M V F F A N K I A E L R K E Y D K L D K E D (152)
L + R K+
AcrIC3 E L A A S V -E -A T N E M Y R E L D A E R A Q I N K A L E -G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;