3D Structure for uvig_50028_CDS_0030 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 84.07 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_50028_CDS_0030 1 AcrIE1 0.72 View Alignment uvig_50028_CDS_0030 M T R E D Y I N T L E L D N A E L R K E N K E L K S Q -L R G T T H C F D E E E H K K L K E E I T N L S K D V D M W N A (60)
M ++ + A
AcrIE1 M -E K -K L S ---D A Q ----V -------A L -----------------------V -------A
uvig_50028_CDS_0030 K Y N D M F D E N K E L K -E E N Q T L K K Q V E N C Y C N R T D C S G R I K D S K V Y D S L V Q K I E T Q Q K E F I E (120)
+L+ +E +
AcrIE1 A W R K ----Y P D L R E -----------------------------------S L E E A -A S I L S
uvig_50028_CDS_0030 W L E Y K I D I C D S F L D T I K S D L Q -E -T P Y G V I S A N -K D I -T T R -I K E N E T A H K V Y K E I L Q K Y (180)
+ ++ + + + + + ++
AcrIE1 L I V F Q A E T L S D Q A N E L A N Y I R R -Q G -L ---E E A E -G A C -R N I -D I M R A K W V E V C G E V N Q H
uvig_50028_CDS_0030 K -S I I G V S D -E S -R (194)
+ G
AcrIE1 G I R V Y G D A I D R D V D
uvig_50028_CDS_0030 2 AcrIE6 0.64 View Alignment uvig_50028_CDS_0030 M T R E D Y I N T L E -L -D -N -A E L R K E N K E L K S Q L R G T T H C F D E E E H K K L K E E I T N L S -K D V D (60)
M
AcrIE6 M -N -N D T ----E -V -L -E --------Q ----Q ---------------I -------K ----
uvig_50028_CDS_0030 M W N A K Y N D M F D E N K -E -L -K -E E N -Q -T L K K Q V E N C Y C N R T D C S G R I K D S K V Y D S L V -Q K (120)
E L + +
AcrIE6 -------A F E ----L -L -A -D -E L K -D R L P -T ---L --------------E I L ----S -P
uvig_50028_CDS_0030 I E T Q Q K E F I E W -L E Y K I -D -I C D -S -F -L D T I K S D L Q -E T P Y G -V I S A N -K D I T T R I K E N (180)
T + + ++ L + G
AcrIE6 M Y T A V M V T Y D L I G -K Q L A -S R R -A -E -L I E ----I L E E -Q Y P G H -----A ----------
uvig_50028_CDS_0030 E T A H K V Y K E I L Q K Y K S I I G V S D E S -R (206)
+
AcrIE6 -----------A ----D L S -I K N L C P
uvig_50028_CDS_0030 3 AcrIF4 0.57 View Alignment uvig_50028_CDS_0030 M T R E D Y I N T L E L D N A E L R K E N K E L K S Q L R G T T H C F D E E E H K K L K E E I T N L S K D V D M W N A K (60)
M D + L T
AcrIF4 M M -T I ----S K T D ----------I D C Y L -Q T ------------------Y ----V -----
uvig_50028_CDS_0030 Y N D M F D -E N K E L K E -E N Q T L K K Q V E N C Y C N -R T D C S G R I K -D S K V Y D S L V Q ---------(120)
+ D + V
AcrIF4 ------V ----I D P V --------S N -G W Q W G I -D --E N G V G G -A L H H G R V E M V E G E N G Y F
uvig_50028_CDS_0030 ----K -I E -T Q Q K E F I E W L E Y K -I D I C D S -F L -D -T I K S D L -Q -E T P Y G V I S A N K D I T T R (180)
+ KE + +
AcrIF4 G L R G -A T H P -T E K E A M A A A L G Y L W K ----C -R Q -D ----L -V -A I -A R ----------N -
uvig_50028_CDS_0030 I K E N E T A H K V Y K E I L Q K Y -K S I I G V S D E S -R (211)
AcrIF4 ---D -------A ---I E -A ----E K Y -R A K A
uvig_50028_CDS_0030 4 AcrIIA19 0.56 View Alignment uvig_50028_CDS_0030 M T R E D Y I N T L E L D N A E L R K E N K E L K S Q -L R G T T H C F D E E E H K K L K E E I -T N L -S -K D V D M (60)
M I + K + L
AcrIIA19 M K L ---I V E V ---E E T N Y K N L V N Y T K L T -N E -----------S H N I L V N -R L I -S -----
uvig_50028_CDS_0030 W N A -K Y N D M F D E N K E L K E E N Q T L K K Q V E N C Y C N R T D C S G R I K D S K V Y D S L V Q -K I E T Q Q -(120)
+ E +
AcrIIA19 ---E Y I T --------------K P Y E -------L ---R --------------L D L S E R Y S N
uvig_50028_CDS_0030 K E F I E W L E Y K I D I C D S F L D T I K S D L Q E T P Y G V -I S A N K D I T T -R I K -E N E T -A H -K -V Y -(180)
++ IE+ I+ C L IK ++ + E +
AcrIIA19 R D L I E F K F M L I E Y C K E A L Q D I K E L A N S D E --A Y -E T D E A F E A V F R -Q L F E -E V -I -S N -P
uvig_50028_CDS_0030 K E -I L Q -K Y K S I I G V S D E S R (200)
+ +L +S +E++
AcrIIA19 -D T V L -K A F H S Y T S F L E E N K
uvig_50028_CDS_0030 5 AcrIF25 0.55 View Alignment uvig_50028_CDS_0030 M T R E D Y I N T L E L D N A E L R K E N K E L K S Q L R G T T H C F D E -E E H K K L -K E E I T N L S K D V D M W -(60)
M +D + + E K+
AcrIF25 M D N D D --K K ---P -------D ------A -L I ----H L R -----V P A E V K G R W V K E S R L E G
uvig_50028_CDS_0030 N -A K Y -N D M -F D E N K E L K E E N Q T -L -K -K Q V E N C Y C N R T D C S G R I -K D S K V Y D S L V Q K I E (120)
K D ++ +
AcrIF25 -M -K L T -D W I T -------G ----R -V -E A ----K ---A -------L ----S I A E V L E E A A
uvig_50028_CDS_0030 T Q Q K ---------------E ----F -I ---------------E W L E Y K I D I C D S F L D -T I (180)
+ + + + + L +
AcrIF25 A M A R S L E D S P I F Y R N K L C A D G I V T -I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S S G L
uvig_50028_CDS_0030 K S D L Q ----E --T P Y G V I S A N K D I T T R I K E N E T A H K V Y K E I L Q K Y K S I I G -V S D E S -R (238)
+ G +++ ++ + + + +G + E R
AcrIF25 P D S Y S G A V P -N E G R T G W -V ---T A S Q M A R L F G ----G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;