3D Structure for uvig_499591_CDS_0023 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 82.02 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_499591_CDS_0023 1 AcrIIA7 0.71 View Alignment uvig_499591_CDS_0023 M S K E T F D F -S E A L R R M K E G K K V R R ------------------------------------(60)
M+ AL K G+ V R
AcrIIA7 M T --F ---G -Q A L E S L K R G H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V K S L P E S F K R
uvig_499591_CDS_0023 ------------N ---G C Y F S L S I N K Y K E I S I L Y Q Q S S I E S F T H -V V P H Y W H F F S L D D I L (120)
Y V S D L
AcrIIA7 W V A N N H G D S E T D R I K F T A Y L C -M K A A D G T ---------------I -V N G W -L -A S Q T D M L
uvig_499591_CDS_0023 A T D W E E V E E (129)
A+DW V E
AcrIIA7 A N D W V I V -E
uvig_499591_CDS_0023 2 AcrIIA4 0.56 View Alignment uvig_499591_CDS_0023 M S K E T F D F S E A L R R M K -E G K K V R R ---N ----G -C Y F S L S I N K Y K E I S I L Y Q Q S S I ---E (60)
M+ +++R K V+ N ++ + + E
AcrIIA4 M N -I -N ---D L I R E I K N K D Y T V K L S G T D S N S I -T Q L I I R V N N -D G N E Y V I S E S E N E S I V E
uvig_499591_CDS_0023 S F T H V V -P H -Y W H F -F S L D D I L A T D --W E E --V -E E (96)
F + ++
AcrIIA4 K F I S A F K -N G W N Q E Y E D E E E F Y N D M Q T I T -L K S E L N
uvig_499591_CDS_0023 3 AcrVIA3 0.55 View Alignment uvig_499591_CDS_0023 M S K E T F D F S E A L -R R M K E G K K V -R R --N G C Y -F -S L S I N K Y K ---E I S I L -Y Q Q S S I E S F (60)
M K F L + + +G + E+S+L +
AcrVIA3 M F K -E --F ---L E -K C L R Y G N L Y I L E E T G D R K K V K R I S K R H G K V T E A S V L L F D S -G T K --
uvig_499591_CDS_0023 T H V V P H Y W H F F -S L -D -D -I -L A -T D W E E ---------V ---E E (104)
+ +
AcrVIA3 ---------R T T I -N -E -I Y L --N S Q G Y F I I R D Q K R L K L E K F -K
uvig_499591_CDS_0023 4 AcrIIA12 0.53 View Alignment uvig_499591_CDS_0023 M S K E T F D F S E A L R R M K E G K K V R R N G C Y F S L -S I -N K Y -K E I S I L -Y Q Q S S I E S F T -H V V P (60)
M T ++++ K K N + ++ V
AcrIIA12 M -S K T M Y K N D V I E L I K N A K T --N N E E L L F T S -V E R N T R E A A T Q Y F R C P E ------K -H V S
uvig_499591_CDS_0023 H Y W H F F S L D -D I L A T D W E E -------V -------E E (96)
+E
AcrIIA12 D A G V Y Y G E -D -F E F D G F E I F E D D L I Y T R S Y D K E E L N
uvig_499591_CDS_0023 5 AcrIF18 0.52 View Alignment uvig_499591_CDS_0023 M S K E T F D F S E A L R R M -K E G K K -V R R N G C Y F S L S I N K Y K E -I S I -L Y Q Q S S I E S F T H V V P H (60)
M+ G E + +V
AcrIF18 M T -T -I K A A Y ---I S K --D --Q N W N D G T T T Y W F D V -N G E T -F G V V H G G E -S -W N A K V -V D
uvig_499591_CDS_0023 Y W H F F S L D D I L A T D ---W -E -E -V E E (86)
S D + + E
AcrIF18 C D G A P S -D Q Y T V D Q F N I T E -D -M I A E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;