3D Structure for uvig_49141_CDS_0027 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.04 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_49141_CDS_0027 1 AcrIE6 0.74 View Alignment uvig_49141_CDS_0027 M S K E E K H ---L Q T K I -R ----I F E D M L L R C -K -------N F G Q A E A I Q I E L T R M R A K L Q K (60)
M+ + D L + ++I L RA L
AcrIE6 M N N D T E V L E Q Q I K A F E -L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E
uvig_49141_CDS_0027 L ----Y ---F -K R -M ---E S (80)
+ Y
AcrIE6 I L E E Q Y P G H A A D L S I K N L C P
uvig_49141_CDS_0027 2 AcrIF23 0.60 View Alignment uvig_49141_CDS_0027 M S K E E K H ----------L Q -------------T ---------------------------(60)
M+
AcrIF23 M T N F Q T W L D S A D I P V Q Q N -G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_49141_CDS_0027 -------------K --------I R ------------------I -F -E D -M L -L -R C -K -N (120)
+ +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V -Q Q M N Q D Q A E M A C D P S G L L T A -A -K F W -I -E N -R N D S
uvig_49141_CDS_0027 F G Q A E A I Q I E L T ----R M R A -K -L ---------Q -K -L ----Y F K R M -E --S (172)
+ Y
AcrIF23 A Q E I A G F V M Q Q K A L L A Q H -R S -A -K A A G Q A D K V -A -K -I A A E Y N A L T A R W G F
uvig_49141_CDS_0027 3 AcrIIC4 0.55 View Alignment uvig_49141_CDS_0027 M S -K --E -E K H -----L -------Q T ----K -------I R -I F E D ----M L L R C -K ----(60)
M +
AcrIIC4 M K I T S S -N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E -Q F S S A R D F F K N E N Y S K E L
uvig_49141_CDS_0027 -N F G Q A E -A I Q -I E L T -R M R A K L Q K L Y F K R M -E S (94)
+ E+ K+ L K
AcrIIC4 A E -K F N K E -A V N -E A V E -K L Q K A I D L A E K Q G I Q F
uvig_49141_CDS_0027 4 AcrIIA28 0.54 View Alignment uvig_49141_CDS_0027 M -S ----K E E K H L ------------Q T K I R I F E D -M L -L -R C ----K ----N F G Q A E A I Q (60)
M + K L + + F
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K E L F N S M H D F R S Q -H A -K E -A R I P G W S D K Y N K L E K K M L
uvig_49141_CDS_0027 I E L T R M R A -K -L Q K L --------Y F K -R -M E -S (93)
+ L S
AcrIIA28 S D F E E V T G I -K Y D T L E S E L I W D N L S N K -F L Y N S
uvig_49141_CDS_0027 5 AcrIE1 0.52 View Alignment uvig_49141_CDS_0027 M S ---K -E -E K H -L -Q T ----------K ----------I -R -------I F E D ----M L L R (60)
M I + R
AcrIE1 M E K K L S D -A Q V -A -L V A A W R K Y P D L R E S L E E A A S I L S L I V -F Q A E T L S D Q A N E L A N Y I R R
uvig_49141_CDS_0027 C -K ------N -F G Q A E A I Q I E L T R M R A K L Q K L ----Y F K R M --E -S (106)
++++ + ++ Y +
AcrIE1 -Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;