3D Structure for uvig_486964_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 87.03 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_486964_CDS_0004 1 AcrIIA7 0.88 View Alignment uvig_486964_CDS_0004 M V E N L C R M P K Y I G -T K -V -V Q A K P M -T -M -T D A Q I V L G R E I K P A T V E E D G Y L V V Y N D G Y R (60)
M +
AcrIIA7 M T ---------F -G Q -A -L ----E S L -K -R ------------------------------
uvig_486964_CDS_0004 S W S P K R V F D A A Y R K L G E M D F G K V I E A L K S G L A V R R K G W N G K G M -F V V K Q I P S H I E G G I -I (120)
+V RKGWNGKGM + +
AcrIIA7 ----------------------------G -H L V A R K G W N G K G M F I F -M R P E D S L P T N M I V
uvig_486964_CDS_0004 T N M Q S L P Q S A K N I L L S R E N ----A H -I -D -Y T N Q -M L I I N P D G R A -D S W V P S V S D V F A E D (180)
++ SLP S K +++ + DG + W+ S +D A D
AcrIIA7 N Q V K S L P E S F K R W V A N N H G D S E T -D R -I -K -F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D
uvig_486964_CDS_0004 W E I V E D K A S E L K K S Y A K (197)
W I
AcrIIA7 W V I -----------V -E
uvig_486964_CDS_0004 2 AcrIIA4 0.83 View Alignment uvig_486964_CDS_0004 M V E N L C R M P K Y I G -T K -V -V -Q A K P M T -M -T D A Q -I -V -L G R -E -I K P A T V E E D G Y L V V Y (60)
M I ++
AcrIIA4 M N ---------I -N D -L -I -R ----E I K -N -K D Y T -V K L -S G T -D -S ---N S I T Q L I I R V
uvig_486964_CDS_0004 -N D G Y R S W S P K R V F D A A Y R K L G E M D F G K V I E A L K S G L A V ---R R K G W N ---G K G M F V V K Q (120)
NDG E K I A K+G +
AcrIIA4 N N D G N E Y V I S E S --------E N E S I V E K F I S A F K N G W N Q E Y E -D E E E F Y N D M Q T I T L K S E
uvig_486964_CDS_0004 I P S H I E G G I I T N M Q S L P Q S A K N I L L S R E N A H I D Y T N Q M L I I N P D G R A D S W V P S V S D V F A E (180)
AcrIIA4 ------------------------------------------------------------
uvig_486964_CDS_0004 D W E I V E D K A S E L K K S Y A K (198)
+
AcrIIA4 ----------------L N
uvig_486964_CDS_0004 3 AcrIIA12 0.81 View Alignment uvig_486964_CDS_0004 M V E N L C R M P -K Y I G T K V V Q A K P M T M T D -A -Q I V L G R E I K P A T V E E D G Y L V V Y N D G Y R S W S (60)
M
AcrIIA12 M -S -----K T -------M --------Y K -N ------------------------------
uvig_486964_CDS_0004 P K R V F D A A Y R K L G E M D -F -G -K V I -E A L -K S G L A V R -R K G -W -N --G -K G M F V V K Q I P S H (120)
+I + + + +
AcrIIA12 --------------D -V -I -E -L I K N -A K T N N E E L L F T S V E R N T R E A A T Q Y --F -R ----
uvig_486964_CDS_0004 I E G G I I T N M Q S L P Q S -A K N I L L S R E N A H I D Y T N Q M L I I N P D G R A D S W V -P S V S D V F A E D W (180)
H+ + + D + +
AcrIIA12 -----------C ---P -E K --------H V --S D A G V Y Y G E D -------F -----E -F D G F
uvig_486964_CDS_0004 E I V E D K A ----S E L K K S Y A K (200)
EI ED + S K +
AcrIIA12 E I F E D D L I Y T R S Y D K E E -L N
uvig_486964_CDS_0004 4 AcrIE9 0.81 View Alignment uvig_486964_CDS_0004 M V E N L C R M P K Y I G T K V V Q A K P M T M T D A Q I V L G R E I K P A T V E E D G Y L V V Y N D G Y R S W S P K R (60)
M K +
AcrIE9 M E ------M Q I N S R K ------------------------L --------------------
uvig_486964_CDS_0004 V F D A A Y R K L G E M D F G K V I E A L K S G L A V R R K G W N G K G M F V V K Q I P S H -I E G G I -I -T N M Q S (120)
G + G
AcrIE9 -----------------------G R T I T F S R P -G A S Y ---------I -----F -A ----D
uvig_486964_CDS_0004 L P Q S A -K N I L L S R E N A H I D Y T N Q M L I I N P ----D -G R A D S W V P S V S D V F A E D W E I V E D K A (180)
L + + G S + S +D E
AcrIE9 L ----N -------------G K S G -T L G C Q I C S G -G G T M G S T L -S ---Y D G D D Q A Q F E A I C
uvig_486964_CDS_0004 -S E L K K S Y A -K (191)
+
AcrIE9 R R W Y R A H V R G E
uvig_486964_CDS_0004 5 AcrIF19 0.81 View Alignment uvig_486964_CDS_0004 M V E N L C R M P K Y I G T K V -V -Q -A -K P -M -T M T D A Q I V L G R E I K P A T V E E D G Y L V V Y N D G Y R (60)
M +VY
AcrIF19 M K ---------P ----L -H -T -M -N Y -D ------------------N -N Q M S L V Y E -S --
uvig_486964_CDS_0004 S W S P K R V F D A A Y R K L G E M D F G K V I E A L -K -S -G L A V R R K G -W -N G K G -M -F V V K Q I P S H I (120)
G V+
AcrIF19 --------------------------Y D -E -Y G -------F -E -Y S V K L K I S V R D Y R G --
uvig_486964_CDS_0004 E G G I I T N M Q S L P Q S A K N I L L -S R E -N A H I D Y T N Q M L I I N P D G R A D S -W -V -P S -V S -D V -(180)
++ + E + +
AcrIF19 --I D V S A F N A --------F P E -W E D -T -L R M R D R V ---------M -S -V -E E -I -E N -A M
uvig_486964_CDS_0004 F A -E D -W E I V ---E -D K A S E L K K S Y A K (207)
+ + D
AcrIF19 -I S R -Y K S L F I A P -P D -C -T Y E F --D I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;