3D Structure for uvig_480637_CDS_0016 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.73 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_480637_CDS_0016 1 AcrIIA7 0.75 View Alignment uvig_480637_CDS_0016 M K T L D E K A A E Y A A S V V S C N K E A K E C E G L I Q T A Y I L G A T E G E L L R E E T G T F G Q A L E S L K R G (60)
M T + S+
AcrIIA7 M -T F G ----Q A L E S L K R -------------------G -----------------------
uvig_480637_CDS_0016 H L V T R K G W N G K G M F I F M R P A D E L H I G F V A K D I K S L P Q K V K D Y Y Y Q D C V D E N G N P I E L -E K (120)
HLV RKGWNGKGMFIFMRP D L ++ +KSLP K G
AcrIIA7 H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V K S L P E S F K R W V A ----N N H G -D ---S -E
uvig_480637_CDS_0016 -D D T V K F T A Y I C M K A A D G S I V N G W L A S Q T D M L A N D W M I F E F (161)
D +KFTAY+CMKAADG+IVNGWLASQTDMLANDW I
AcrIIA7 T -D R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V -E
uvig_480637_CDS_0016 2 AcrIIA12 0.53 View Alignment uvig_480637_CDS_0016 M K T L D E K A A -E Y A A S V V S C N K E A K E C E G L I Q T A Y I L G -A T E G E L L R E E T G -T -F -G -Q A -(60)
M + +
AcrIIA12 M -S K T ----M -------------------------Y K N ------------D -V -I -E -L I
uvig_480637_CDS_0016 L -E S -L K R G H L V T -R K G -W N -G --K G -M F I F -M R P A D E L H I G F -V A K D I -K S L P Q K V K D Y (120)
+ + N R + D+ Y
AcrIIA12 -K -N A K T N N E E L L F T S V E R N T R E A A T Q -Y --F -R C P E K H ----V --S D A G V --------Y
uvig_480637_CDS_0016 Y Y Q D C V D -E N G N P I E -L -E K D D T V K F T A Y I C M K A A D G S I V N G -W L A S -Q T D M L A N D W M -I (180)
Y F + L+ + D
AcrIIA12 Y G -----E -------D -F ------E F D G -F E I --F E ----D -D -L I Y T R S -Y ---D K -E -
uvig_480637_CDS_0016 F -E F (184)
AcrIIA12 -E L N
uvig_480637_CDS_0016 3 AcrIC1 0.51 View Alignment uvig_480637_CDS_0016 M K T L D E K A A E Y A A S V V S C N K E -------------------A K E C E G --L I -Q T ---A Y -I (60)
M +L A+ V + +
AcrIC1 M N N L K K T A I T H -D G V F A Y K N T E T V I G S V G R N D I V M A I D A T -H --G -E F N -D K N F I I Y A D -
uvig_480637_CDS_0016 -L G ---A --------T E G -----E L -L -------R ----E -E ----T -G -T F G -Q -A L -E (120)
+ + + +
AcrIC1 T -N G N P I Y L G Y A Y L D D N N D A H I D L -A V G A C N E D D D F D E K -E -I H E M I A -E Q -M E -L -A K R
uvig_480637_CDS_0016 S L -K R G H L V T R K G W N G K G M F I F M R P A D E L H I G F V A K D I K S L P Q K V K D Y Y Y Q D C V D E N G N P (180)
G + + +
AcrIC1 Y -Q E L G D T -V ----H -G T T R L A F D D D G Y M T -V R L D Q --Q -A Y P D --------Y R P -----
uvig_480637_CDS_0016 -I E L -E K D D T V K F T A Y -I C M K A A D G S I V -N G W L -A -------S -Q -T -D M L A N D W M I -F E (240)
D A G + WL + +A D E
AcrIC1 E -N -D --D -K H I M W R -A -L A L T A T G K E L E V F W L V E D Y E D E E V N S -W -D F D I A D D ---W R E
uvig_480637_CDS_0016 F (241)
AcrIC1 L
uvig_480637_CDS_0016 4 AcrIIA4 0.49 View Alignment uvig_480637_CDS_0016 M K T L D E K A -A E Y A A S V V S C N K E A K -E C E G L I Q T A Y I L G A T E G E L L R E E T G T F G Q A L E S L K (60)
M + + + + E+K
AcrIIA4 M -N ----I N -D ---L I R ----E I K N ------------------K ----------------
uvig_480637_CDS_0016 R G H L V T R K G W N --G -K G M F I F M R P A D E L H I G F V -A K D I K S L P Q K V K D Y Y Y Q D C V D E N G N P (120)
V G I + + S+ K + +
AcrIIA4 -D Y T V K L S G T D S N S I T Q L I I R V N N D G N E Y V I S -E S -E N E S I V E K F I S A F K N G W ----N Q -
uvig_480637_CDS_0016 I E -L E K D -D T V -K -F T A Y I C M K A A D G S I V N G W L A S Q T D M L A N -D W M I F E -F (171)
+ + + + E
AcrIIA4 E Y E --D E E E F Y N -D ---M ---------------Q T ---I T L K S -----E L N
uvig_480637_CDS_0016 5 AcrVIA3 0.49 View Alignment uvig_480637_CDS_0016 M K T L D E K A A -E -Y A -A -S V V S C N K E A K E C E G L I Q T A Y I L G A T E G E L L R E E T G T F G Q A L E S (60)
M + + +
AcrVIA3 M --F ---K -E -F -L E -K -C L ---R --------Y G --------------------------
uvig_480637_CDS_0016 L K R G H L V T R K G W N G -K G M -F I F M R P A D E L H I G F V A K D I K S L P Q K V K D Y Y Y Q D C V D E N G N P (120)
L K + +
AcrVIA3 ----N L Y I L E E T G D R K K -V K R I S K R H G K V -------------------------------
uvig_480637_CDS_0016 I E L E K D D T V K F T A Y I C M K A A -D --G S I V N G W L A S -Q T D -M L A N -D W M -I -F E -F (174)
+ +N ++ Q +
AcrVIA3 ----T -----E A S V -L L F -D S G T K R T T I N E I Y L N S Q G Y F I I R D Q K R L K -L E K F K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;