3D Structure for uvig_480129_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.37 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_480129_CDS_0002 1 AcrIE6 0.72 View Alignment uvig_480129_CDS_0002 M E E L K K C Y Q E L Q K M I A E I E N R H D T D I M D F I N L D E E V K A E Y M G D W T E K D V Q G W E Y L V N R A S (60)
M I E D E + + + +
AcrIE6 M N N D T E V L ---E Q Q I K A F E L L A D E L K D R L P -T L E I L ----S -P M Y T A V M V T Y D L I G K Q L A
uvig_480129_CDS_0002 T I R K A Y R I V A E E L H T G -E --F --L P E I D E (89)
+ R ++EE G + +
AcrIE6 S R R A E L I E I L E E Q Y P G H A A D -L S I K N L C P
uvig_480129_CDS_0002 2 AcrIE1 0.59 View Alignment uvig_480129_CDS_0002 M -E E L K K C Y Q E L Q -------------K -M I A E I E N R H D T D I M D F I N L D E E V K A E Y M -G D W (60)
M L L +A I + + E+ Y
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E -A A S I L S L I V F Q A E T L S D Q A N E L A N -Y I R R -Q
uvig_480129_CDS_0002 T E K D V Q G W E Y L V N R A S T I R K A Y R I V A E E L -H T G -E ----F L P E I D E (106)
+ E + + R V E+ G + +
AcrIE1 ---G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_480129_CDS_0002 3 AcrVA1 0.59 View Alignment uvig_480129_CDS_0002 M -E ---E L -K K -C -------Y Q E --------L Q -K -M I ----A -E -I E -N -R ---H D T --(60)
M E K +
AcrVA1 M Y E A K E R Y A K -K -K M Q E N T K I D T L T D E Q H D A -L A -Q -L C A F R -H -K F -H -S N K D S L F L S E
uvig_480129_CDS_0002 ---------------------D I M ----D F I N -----L D E E ----V K A ---------E -- (120)
+ ++ E
AcrVA1 S A F S G E F S F E M Q S D E N S K L R E V G L P T I E W S F -Y D N S H I P D D S F R E W F -N F A N Y S E L S E T I
uvig_480129_CDS_0002 --Y M -----------G D -W -T E K D V -Q G -W E Y L V N R A S T I R K A Y R I V A E E L H T G -E F L P E (180)
+ + I K R + EE T
AcrVA1 Q E Q G L E L D L D D D E T Y E -L -V Y D E L Y T -E A M G E Y E E L N Q D I E K Y L R R I D E E H G T -Q Y C P T G
uvig_480129_CDS_0002 I ---D E (186)
AcrVA1 F A R L -R
uvig_480129_CDS_0002 4 AcrIIC4 0.58 View Alignment uvig_480129_CDS_0002 M E E L K K C Y Q E L ------------Q K M I A -E -I E N -R -H D T ---D I M D F I N L D E ---E V K A (60)
M + K I +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E -P I K -G -L F K S A V E Q F S S A R D F F K N E N -Y S K
uvig_480129_CDS_0002 E Y M G D W T E -K D V Q G W E Y L V N R A S T I R K A Y R I V A E E L H T G E F L P E I D E (107)
E ++ + A + + E
AcrIIC4 E L A E K F N K E --------------A V N E A V E K L Q K A I D L A E K Q G I Q -F
uvig_480129_CDS_0002 5 AcrIF23 0.57 View Alignment uvig_480129_CDS_0002 M E E L K K C Y Q E ---L -Q --K -M ----I -----------------------------A ----(60)
M Q A
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_480129_CDS_0002 -----------E I E -N R H D T D I M D F I N L D E E V K A E Y M G D ----W T E K D V Q G W E Y L V N R A S (120)
E + + N D A + ++ +
AcrIF23 G R A L T G T A R Q K E W A E -K I R A E K V Q Q M N Q D Q A E M A C D P -S G L L T A A K F W I E N R N D S A Q E I A
uvig_480129_CDS_0002 T I R K A Y R I V A E E L ----H T -G ------E ----F L P E I ---D --E (164)
++++ +
AcrIF23 G F V M Q Q K A L L A Q H R S A K A -A -G Q A D K V A K I A A E Y N A L T A R -W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;