3D Structure for uvig_47556_CDS_0009 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.69 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_47556_CDS_0009 1 AcrIE1 0.71 View Alignment uvig_47556_CDS_0009 M D I E K L K R C L K C C A D D N -S -K A C N K C E L E -Y -G E E E C Q N L C G Y A A T A F S T L Q I E N Q A L R N (60)
M KL A + AA++ S + L
AcrIE1 M -E K K L S D A ----Q V A -L -V -A A W R K Y --P -D ----L R E S L E E A A S I L S L I V F Q A E T L S D
uvig_47556_CDS_0009 A A S G F K A E N -E -K L R E M Y Q K E K A V C H A T Q A E L D Q M K R -E N E T L K H A L Q -N -W H E E -V (117)
A+ E + A N ++ +
AcrIE1 Q A N E L A N Y I R -R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D -A I D R D V D
uvig_47556_CDS_0009 2 AcrIC3 0.63 View Alignment uvig_47556_CDS_0009 M D I E K L K R C L K C C A D D N S K A C N K C E L E Y G E -E E C Q N L C G Y A A T A F S -T L -Q I --------(60)
M + + N E ++ +
AcrIC3 M S -I Q V T S T N G R T V --N L -E ----------I -E L G S V V A S S G Q -V K F -M A D -K T D R G L E S
uvig_47556_CDS_0009 ----E N Q A L R ----N -A A S G F K A E N E K L -R E M Y Q -K E -K A V C H -A -T -Q -A -E L -D -Q -M (120)
+ E +
AcrIC3 R F L V P E A G N -R R I E V A L ---T G R ----D L -E A A N A -L F S -E L A A -S -V -E -A T -N -E -M -
uvig_47556_CDS_0009 -K -R -E -N -E T L K H A L Q N -W -H E E V (145)
+ ++ E
AcrIC3 Y -R -E -L -D -A E R A Q I N K A -L -E -G
uvig_47556_CDS_0009 3 AcrIE6 0.56 View Alignment uvig_47556_CDS_0009 M D I E K L K R C L K C C A D D N S K A C N K C E L E Y G E E E C Q N L C G Y A A T A F S T L Q I E N Q A L R N A A S G (60)
M L + L L +
AcrIE6 M -N -N D T E V L ---E -Q -------------------Q I K A F E L L A D E L K D R L P T L E I L ---
uvig_47556_CDS_0009 F K A E N E K L R E M Y Q K E K A V C H A T Q A E L D Q M K -R E N E T L K H A L Q N W -H E -E --V (112)
+ Y AEL L +
AcrIE6 -S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I L E E Q Y P G H A A D L --S I K -N -L C P
uvig_47556_CDS_0009 4 AcrIF4 0.56 View Alignment uvig_47556_CDS_0009 M D I E K L K R C L K C C A D D N S K A C N K C E L E Y G -E E -E C --Q -N L C G ---Y A A -T -A F S T L Q I -(60)
M K + C + + + G N +
AcrIF4 M M -T I S K T D I D C Y L Q -T Y V V I D P -V -S N G W Q -W G -I D -E N G --V G G A L H H -G R -V E M V E G
uvig_47556_CDS_0009 E N Q A L R N A A S G F K A E N E K L -R E M Y Q K E K A V C H A T Q A -E L D Q M K R E N E T L K H -A -L Q N W H E (120)
+ + +E L R +
AcrIF4 -E N G Y F G L R G A T ---H P T -E K E A M A A A L G Y L W K C R Q D -L V A I A R N D ---A I E -A -E K Y R A
uvig_47556_CDS_0009 E V (122)
+
AcrIF4 K A
uvig_47556_CDS_0009 5 AcrIIA3 0.55 View Alignment uvig_47556_CDS_0009 M -D I E K L K R C L -K C C A D D N S K A C N K C E -L -E -Y G E E E C Q N L C G Y A A T A F S -T L -Q I E N Q A (60)
M + + + D N + E + A +
AcrIIA3 M F N K A E I M K Q A W N W F N D S N I W L S D I E W V S Y -T D K E K S F S V C L K A A W S K A K E -E V E E S K K E
uvig_47556_CDS_0009 L R N A A S G F K -A -E N -E -K L R E M Y Q K E K A ---------V C H -A T Q A E L D Q M K R E N -E T -L K (120)
+ +A + V +
AcrIIA3 S K H I A K S E E L -K A -W -N W A E R K L G L H F N I S D D E K F T S V K D E T K I N F G L S V W A C A M -K A -V
uvig_47556_CDS_0009 -H -A -L -Q -N -W -H E -E V (138)
+
AcrIIA3 K -L -H -N -D -L -F P Q T A A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;