3D Structure for uvig_4722_CDS_0023 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 86.74 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_4722_CDS_0023 1 AcrIIA8 0.70 View Alignment uvig_4722_CDS_0023 M L D I N K Q K M F Y S L I G G K V P V Y E L D ------K -D G K V K T I T V D G K E V -P K T T G E Y R T G Y G -(60)
M + + L G + D G
AcrIIA8 M S I F T D -M I P ---------A E L L I N E Y K K G -Q S G A K H ----D ----N ---Y V S ----V G R
uvig_4722_CDS_0023 K P V C -F Y A N I S N A L -D E ------------A -L -A K -S F G I D D S T N Y V Q I C -A E K N E F P L T (120)
N ID Y + +
AcrIIA8 -I M V A I ---Y K N N S F K N T G T V K Y Q D S T H S G I -T M -S K V F I D -G K E Y R I D -I -D -T Q H Y E V
uvig_4722_CDS_0023 V G T V I W K R S A V A Y E -D V N Q ---T I V D A L S A D Y T V K G V A D E G L T V D L F L L Q R N V -K (175)
+L
AcrIIA8 Q D F D T S G -------R ----Q T T ---L I L K R ----------------I --D L --Y G
uvig_4722_CDS_0023 2 AcrVIA3 0.41 View Alignment uvig_4722_CDS_0023 M L D I N K Q K -M F Y S L I G G K V P V Y E L D K D G K V K T I T V D G K E V P K T T G E Y R T G Y G K P V C F Y A N (60)
M K Y G +
AcrVIA3 M F K E F L E K C L R -----------------------------------Y ----G -N L Y I L E E
uvig_4722_CDS_0023 I S N A L D E A L A K S F G I D D S T N -Y V -Q I C A E K N E F P L T V -G T V I W -K R S A V A Y E D V N Q T I V D (120)
+ + +V+ S +N
AcrVIA3 -----------T G -D -----R -K K -V K R I S K R H G K V T E A S V L L F -D S G T K R T T I N E ----
uvig_4722_CDS_0023 -A -L -S A -D Y T V K G V A D E G L T V D L F L L Q R N V K (152)
+ Y + + L + K
AcrVIA3 I -Y -L N S Q G Y F I I R D -Q K R --L K ---L E K -F K
uvig_4722_CDS_0023 3 AcrIF8 0.37 View Alignment uvig_4722_CDS_0023 M L D I N K Q K M F Y S L I G G K V P V Y E L D K D G K V K T I T V D G K E V P K T T G E Y R T G Y G K P V C -F ---(60)
M+ D
AcrIF8 M A R -I A P N E ----------------D -S -----------T ------------M S -T A Y I I
uvig_4722_CDS_0023 Y -A N I -S -N A L -D E -A L A K S F G I -D D S T N Y V Q I C A E K N E F --P -L T -V -G T V I W K R S A V A (120)
+ + D +A T + R +
AcrIF8 F N S S -V -A A V -V D -T E I A N G A -N V -T F -------------S T -V -T V -K E E I N A N R D F N L
uvig_4722_CDS_0023 Y E D V N Q T I V D A L S A --D Y T V K G V A D E G L T V D L F L L Q R N V K (160)
N I A + + ++ F +K
AcrIF8 V N A Q N G K I S R A K R W G N E A S K C E Y F G R E I N P T E F -F ---I K
uvig_4722_CDS_0023 4 AcrIF9 0.37 View Alignment uvig_4722_CDS_0023 M L D I N K Q K M F Y S L I G G K V P V Y E L D K D G K V K T I T V D G K E V P K T T G E Y R T G Y G K P V C F Y A N I (60)
M + +
AcrIF9 M K --------------------------------------------------A A Y I I K E V
uvig_4722_CDS_0023 S N A L D E A L A K S F G I D D S T N Y V Q I -C A -E K N E F P -L -T V G T V I -W -K -R -S -A -V A -Y E -D (120)
+N+ + I A + + + E
AcrIF9 Q N I --------N S E R -E G T Q --I E -A T S L S Q A -K -R I A S K E Q C F H -G -T -V -M -R I -E T -
uvig_4722_CDS_0023 -V -N -Q -T I V D A L S A D Y T V K G V A D E G L T V D L F L L Q R N V K (159)
+ ++
AcrIF9 V -N -G -L -W L A Y K E D -G ------------K R W V -D -C -Q
uvig_4722_CDS_0023 5 AcrIIA12 0.37 View Alignment uvig_4722_CDS_0023 M L D I N K Q K M F -Y S L I G G K -V P V Y E L D K D G K V K T I T V D G K E V -P K -T T G E Y R T G Y G K P -V C (60)
M + + +
AcrIIA12 M S K T M ---Y -K N D -V I E L I -K -------------------N A K -T N --------N -E E L -
uvig_4722_CDS_0023 F Y A N I S N A L D E A L A K S F G I D D --S T N Y -V Q I C A E K -N -E F P L T V G T V -I W K R S A V A Y E D V (120)
++ EA+ F + + V G I+ ++
AcrIIA12 L F T S V E R N T R E A A T Q Y F R C P E K H V S D A G V -Y Y ---G -E -D F E F D G -F E I F E D D L I Y T R S -
uvig_4722_CDS_0023 N Q T I V D A L S A D Y T V K G V A D E G L T V D L F L L Q R N V K (154)
+
AcrIIA12 --------------------------Y -D K E E L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;