3D Structure for uvig_470136_CDS_0024 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.39 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_470136_CDS_0024 1 AcrIIA7 0.78 View Alignment uvig_470136_CDS_0024 M K K Y I G T K Q I E A E P -M -T -L -G E A C S K G L V K S E I E E N E S Y K L G Y H I R T E Y G Y E S W S P K E L (60)
M E +
AcrIIA7 M T -----------F G -Q -A -L -E S L ---K -R -----------------------------
uvig_470136_CDS_0024 F E E S Y R E V K E E T P I C F G D A I E V L K Q G G A V R R S G W N G K G L -M V -F K Q V P A H I E -S D I I P K M (120)
+V R GWNGKG + + I+
AcrIIA7 ---------G ----------------H L V A R K G W N G K G M F I -F -M R P E D S L P T N M I V N Q V
uvig_470136_CDS_0024 Q S L P Q S A K D L I L K ----G -K G F I D Y T S Q C L I Y N E N T G R A -D S W V P S I S D V F A E D W E I V E (179)
SLP S K ++ I T G + W+ S +D A DW IVE
AcrIIA7 K S L P E S F K R W V A N N H G D S E T D R I K F T A Y L -C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
uvig_470136_CDS_0024 2 AcrIC1 0.51 View Alignment uvig_470136_CDS_0024 M K K Y I G ---T -K Q -I -E -A E P M -T L G E A C S K G L V K S E -I ---E E N E S Y K L -G Y H -I -R T E (60)
M T +G + +V E
AcrIC1 M N N L K K T A I T H D G V F A Y K N -T E T V I G S V G R N D I V M A -I D A T H G E F ---N D K N F I I -Y A D T
uvig_470136_CDS_0024 Y G Y E S W -S --P -K E L -F -E E ----S -Y ---R ---E -V K E ----E -T -P -I -C F G -D -A I -(120)
G + + + +
AcrIC1 N G N P I Y L G Y A Y L D D -N -N D A H I D L -A V G A C N E D D D F D E K E I H E -M -I -A -E Q -M E -L -A K
uvig_470136_CDS_0024 E V L K -Q -G ----G A V -R -R -S G W N G K G -L M V F K Q V P A H I E -S D I I P K M Q -S L P Q S A K D L I (180)
G G +
AcrIC1 R -Y Q E -L G D T V H G T -T -R -L A F D D D G Y M T V R L --D Q Q A -Y P D -----Y R P -------E -N
uvig_470136_CDS_0024 L -K G K G F I D -Y -T S Q C L I Y N E N T G R A D S ---W V --------P -S I S D V F A E D W E I V E (237)
L+ + TG+ V S A+DW
AcrIC1 -D --D --K -H -I M W R A L A L T -A T G K E L E V F W L V E D Y E D E E V -N S W D F D I A D D W R E -L
uvig_470136_CDS_0024 3 AcrIIA12 0.50 View Alignment uvig_470136_CDS_0024 M K K Y I G T K Q I E A E -P -M T L G E A C S K G -L V K S E I E E N E S Y K L G Y H I R T E Y G Y E S W S P K E L F (60)
M K + E+
AcrIIA12 M S K T M -------Y K -N -D V I E L I ---K ---------------------------------
uvig_470136_CDS_0024 E E S Y R E V K E E T P I C F G D A I E V L K Q G G A V R R -S G W -N -G --K -G L M V F K Q V P A H I E S D -I I (120)
+ + + S N F+
AcrIIA12 -------------------N A K T N N E E L L F T S V E R N T R E A A T Q Y --F R --------C P --
uvig_470136_CDS_0024 P K M -Q S L P Q S A K -D L I L K G K G F -I D Y T S -Q C L I Y N E N T G R A D S W V P S I S -D V -F A -E -D -(180)
+ + Y E D
AcrIIA12 ---E --------K --------H V ---S -D A G V Y Y G E -D F E F D G -F E I F E D -D L I -Y T R -S
uvig_470136_CDS_0024 -W E I -V E (187)
+
AcrIIA12 Y D K E E L N
uvig_470136_CDS_0024 4 AcrIF13 0.48 View Alignment uvig_470136_CDS_0024 M K K Y I G T K Q I E A E P M T L G E A C -S K G L V K S E I E E N E S Y K L G Y H I R T -E Y G -Y E S W -S P K E L (60)
MK + K
AcrIF13 M K L -L N I K I N -E -F A V T A N T -E -----------------------A -G -D E L Y L Q L -P H T
uvig_470136_CDS_0024 F E E S ----Y R E V K -E E T P I C F G D A I -E V L -K Q -G G A V R R S G W N -G K G L M V F K Q V P A -H I -(120)
+ + + ++ ++ E + R G
AcrIF13 P D S Q H S I N H E P L D D D D F V K E V Q E I C D E Y -F G K G D R T L A R L S Y A G G Q A -------Y D S -Y T
uvig_470136_CDS_0024 E -S D I I --P K M Q S L P Q S A K D L I L K G K G F I D Y T S Q C L I Y N E N T G R A D S W V P S -I S D -V F A E (180)
++ + G F++ + +
AcrIF13 -E ----E D G V Y T T ---N ------T G D Q F V E H S Y --------A -D --Y --Y -N V E -V -Y C -
uvig_470136_CDS_0024 D W E I -V E (187)
+
AcrIF13 K A --D L V
uvig_470136_CDS_0024 5 AcrIIA13 0.48 View Alignment uvig_470136_CDS_0024 M K K Y I G T K Q I E A -E P M T L G E A -C S K G -L V K S E I E E N E S Y K L G Y H I R T E Y G Y E S W S P K E L F (60)
M + + +
AcrIIA13 M E V M -------N K -S --I E -I K ----D --------Q ------------N N I V --L I D S -L
uvig_470136_CDS_0024 E E S Y R E V K E E T P I -C F G D A I E V L K Q G G A -V R R S G W -N -G K -G L M V F K Q V --P A -H I E S D I (120)
++ ++ + G +
AcrIIA13 G Q F F T D I E N D N -N G R -Y N -------I D Y V L L N E V E H D N G N T Y Y E -V G M Y R T E E V P F S D K V
uvig_470136_CDS_0024 I -P -K M -Q S -L P Q S -A K D L I -L -K -G K G F I D Y T S Q C L I Y N E N T G ---R A D S W -V -P -S I -(180)
L + G Y + EN
AcrIIA13 T Q -D N -V -E L L E -D K W L Q I -D -Q -Q G ---E S Y V E -S I F F -E N E E D A R E Y I K L V -L -K G -H
uvig_470136_CDS_0024 S -D V F A ---E D W E I V E (196)
F ++
AcrIIA13 -E -T F E E T A K A I G V I K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;