3D Structure for uvig_469021_CDS_0040 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.83 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_469021_CDS_0040 1 AcrIE6 0.68 View Alignment uvig_469021_CDS_0040 M -K T Y I L L D N L E ----H V L K Q I E D K R D E D L V T H -------P E -N -E -I -I -W -K W A -T -N (60)
M +L++ ++ + D+ +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M -V T -Y -D -L -I -G -K Q L -A -
uvig_469021_CDS_0040 -N F -E N K -I A -M E -K E K ---L -K R V --Y --K K (92)
+ E +
AcrIE6 S -R R A -E L -I E I -L E E Q Y P G H A A D L S I K N L C P
uvig_469021_CDS_0040 2 AcrIF23 0.58 View Alignment uvig_469021_CDS_0040 M -K T Y I L -------L D N L E -----------------------------------------(60)
M + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_469021_CDS_0040 -------H --------V -L K Q I E D K R ----D E -D -L V T H P -E N E I I W K W A T ---N ----- (120)
+ P + K+ N
AcrIF23 G R A L T G T A R Q K E W A E K -I R A E K V Q Q M N Q D Q -A E -M -A C D P S G L L T A A K F W I E N R N D S A Q E
uvig_469021_CDS_0040 ---------------------N F -E N -K I A M E K E K L K R V Y ---K -K (166)
K+A +
AcrIF23 I A G F V M Q Q K A L L A Q H R S A K A A G -Q A -D K V A K I A A E Y N A L T A R W -G F
uvig_469021_CDS_0040 3 AcrIE1 0.57 View Alignment uvig_469021_CDS_0040 M --K ---T Y I L L ----D ----N ----L E --------H --------V -L -K -Q -I E D K R D E (60)
M K ++L L
AcrIE1 M E K K L S D A Q V A L V A A W -R K Y P D L R E S L -E E A A S I L S -L I V F Q A E T -L -S -D -Q -A N E L A N
uvig_469021_CDS_0040 D L V T -H -------P E N -E -I I W -K -W -A T N -N F E N K I A M E K E -K -L K R V Y --K -K (115)
+ N I + +
AcrIE1 Y I R R Q G L E E A E G A C R N I -D I M -R -A -K W -V E V -C G E V N Q H G I R -V Y G D A I D R D V D
uvig_469021_CDS_0040 4 AcrIIA28 0.54 View Alignment uvig_469021_CDS_0040 M K -------T Y I L L D N L -----E -H V L K Q I E D K R D E D L V T --H P E ----N E -I -I W -K -W (60)
MK T LL + + + D R + P +
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q -K E L F N S M H D F R S Q H A K E A R I P G W S D K Y -N -K L -E -K K
uvig_469021_CDS_0040 A T ---N -N F -E N K I A M E ------K E K -L K R V Y -K K (95)
K +
AcrIIA28 M L S D F E E V -T G I K Y D T L E S E L I W D N -L S N K F L Y N S
uvig_469021_CDS_0040 5 AcrIIC4 0.53 View Alignment uvig_469021_CDS_0040 M -K ---T Y ---I L L ---D ---N --------L ----E H -V L K -Q I E D -K R D E D L V T H P E N E (60)
M + + + + + + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P -I K G L F K S -A V E -Q F S S -A R D F F K N E N Y S K
uvig_469021_CDS_0040 ----I I W K W A T N N F E N K I A M E K E K L K R V -Y -K K (93)
K A N K+ + + +
AcrIIC4 E L A E K F N K E A V N E A V E K L Q K A I D L A E K -Q G I Q F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;