3D Structure for uvig_468517_CDS_0088 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.57 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_468517_CDS_0088 1 AcrIIA8 0.70 View Alignment uvig_468517_CDS_0088 M T A --L P A P P E I Y ---F -S -D F A --F -----D ---I -K T -F K I Y R H D T L L H T V S G L D N I E (60)
M++ +P E+ + + IY+ + T + +
AcrIIA8 M S I F T D M I P A E L L I N E Y K -K G --Q S G A K H D N -Y V S V G R I M V A I Y K N N S F K N T G T -V K Y -Q
uvig_468517_CDS_0088 -C -G K -T Y I H F Q L P V D V Q -S G D I L E N ---S D C R Y L V T E I A F D T Y N G S K A L L K A Y V V -A -- (120)
+ V G +Y V++ + + + +
AcrIIA8 D -S T -H S -G I T -M -S K V F I D G K E Y -R I D I D T Q H Y E V Q D -F --D T S -G -R Q T T L I L K R I D L
uvig_468517_CDS_0088 T L (122)
AcrIIA8 Y G
uvig_468517_CDS_0088 2 AcrVIA3 0.48 View Alignment uvig_468517_CDS_0088 M T A L P A P P E I Y F S -D F A F D I K T F K I Y R H D T L L H T V S G L D N I E C G K T Y I H --F Q L P V -D V Q (60)
M E + + I G + V+
AcrVIA3 M -F -K E F L E ----K -C L R Y G -N L Y I L E E --------------T G D R K K V K R I S K R H G K V T
uvig_468517_CDS_0088 S G D I L E -N -S D -C R Y L V T E I A F D T Y N G S K A L L K A ---Y V -V A T -L (105)
+L S R ++EI + + +++ +
AcrVIA3 E A S V L L F -D S G T K R T T I N E I Y L N S -Q -G Y F I I R D Q K R L -K L E K F K
uvig_468517_CDS_0088 3 AcrIIA22 0.46 View Alignment uvig_468517_CDS_0088 M T A L P A P P E I Y F S D F A F D I K T F K I Y R H D T L L H T -V S G L D N I E C G K T Y I H F Q L P V D V Q S G -(60)
M ++ A
AcrIIA22 M -V V E -E T R D ----L A E -T A D C V ----------V -----------------------I -E
uvig_468517_CDS_0088 D -I -L E N S D C R -Y L V T E I A F D T Y N G S K A L L K A Y V --V A T L (100)
L R ++ + D + ++++ + +
AcrIIA22 -A -I L V D D G L R Y R Q L S V G I K D E ---N G D I I R I V P I S T V L I
uvig_468517_CDS_0088 4 AcrIE2 0.42 View Alignment uvig_468517_CDS_0088 M T A L P A P P E I -Y -F S D F A --F -D I K T F K I Y R H D T L L H T -V S G L D N I -E C G K T Y I H F Q ---(60)
M + I I K
AcrIE2 M -N T Y L ---I D -P --R K -N N D N -S G E R F T V D -A -----V -----D I T A A A K ------S A A
uvig_468517_CDS_0088 -L -P -V -D V Q S G D I -L E N -------------------------S D C R Y L V T E I -A F D T Y N (120)
+ V
AcrIE2 Q -Q -I -L G E E F E G L V Y R E T G E S N G S G M F Q A Y H H L H G T N R T E T T V G Y P F H V ---M -E ----
uvig_468517_CDS_0088 G S K A L L K A Y V V A T L (134)
L
AcrIE2 -------------L
uvig_468517_CDS_0088 5 AcrIF18 0.41 View Alignment uvig_468517_CDS_0088 M T A L P A P P E I Y F S D F A F D I K T F K I Y R H D T L L H T -V S G L D -N -I E C -G -K T Y I H F Q L P V D V (60)
MT +Y + K + T
AcrIF18 M T -T --I K A A Y ----I S --K -------------D -Q ---N -W -N D G -T -T T Y W -F D ----
uvig_468517_CDS_0088 Q S G D I ---L E -N -S D C R Y L V T -E I A F -D T Y N -G ----S K A L -L K ---A --Y V ---V A T L (119)
+G+ + ++ G + +
AcrIF18 V N G E T F G V V -H -G -G E S W N -A K -V V D C ----D G A P S D Q ---Y -T V D Q -F N I T E D M I -A E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;