3D Structure for uvig_466516_CDS_0041 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 85.85 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_466516_CDS_0041 1 AcrIIA7 0.91 View Alignment uvig_466516_CDS_0041 M N S G D L R T P S L F M R K F R K E R D M N F K -D -A -F K A M K K G R M V K R P S -W G -G Y W Y W D A E K K --(60)
M+ G K+G+ V R G G + +
AcrIIA7 M T F G ---------------------Q -A -L -E S L K R G H L V A R K G W N G K G M F I F M R P E D S L
uvig_466516_CDS_0041 --T I -M I -Q C R --T ---------K D -N G -E K G D L L D I R E ---------T -Q -M ---V -E Y (120)
+ + G D +
AcrIIA7 P T N -M I -V N Q V K S L P E S F K R W V A -N N H G D S E T D R I K F T A Y L C M K A A D G -T -I V N G W -L -A
uvig_466516_CDS_0041 T M S S I L S D D W M I V E (134)
+ + L DW IVE
AcrIIA7 S Q T D M L A N D W V I V E
uvig_466516_CDS_0041 2 AcrIE9 0.82 View Alignment uvig_466516_CDS_0041 M N S G D L R T P S L F M R K F R K E R D M N F K D A F K A M K K G R M V K R P -S W G G Y W Y W D A E K -K -T I M I (60)
M RK GR + Y D+
AcrIE9 M E --M Q I ----N S R K ---L --------------G R T I T F S R P G A S Y I F A D L N G K S G -T L G
uvig_466516_CDS_0041 Q C R T K D N G E K G D L L D I R -E --T Q M V E Y -T M S S I L S D -D W M I -V E (104)
G G L + Q E E
AcrIE9 C Q I C S G G G T M G S T L S Y D G D D Q A Q F -E A I -C R R W Y R -A -H V -R G E
uvig_466516_CDS_0041 3 AcrIIA12 0.81 View Alignment uvig_466516_CDS_0041 M N S G D L R T P S L F M R K F R K E R D M -N -F -K D A F -K -A M -K K G R M V -K R P S ----W -G -G Y W Y (60)
M+ ++ +
AcrIIA12 M S --K T M ----Y K N --------D -V -I -E L I K -N -A K T N N E E L L F T S V E R N T R E A A T Q Y F
uvig_466516_CDS_0041 W D A E K K T I M I -Q C R T --K -D -N G E K G D L L D I R E T Q M V E Y T M S S I L S D D W -M I -V E (115)
E K + E + I + +
AcrIIA12 R C P E -K H V -S D A G V Y Y G -E -D -F E F D G F E I F E D -D L -------I Y T R S Y D K E E L N
uvig_466516_CDS_0041 4 AcrIIA4 0.80 View Alignment uvig_466516_CDS_0041 M N S G D L R T P S L F M R K -F -R K E R D M N F K D A F K A M K -K -G R M V K R P -S ---W -G G Y W Y W D A E (60)
M + + + K VK +
AcrIIA4 M -N -----I N D ----L -I -R -----------E I K N -K D Y T V K L S G T D S N S I T Q L I I R V N N
uvig_466516_CDS_0041 K -K T I M I Q C R T K D N G E K G D L L D I R E -T Q M V -E -Y T M S S I L S D --D ---W M I V -E (114)
I+ + + +D
AcrIIA4 D G N E Y V I S E S -E N E S I V E K F I S A F K N G W N Q E -Y E D E E E F Y N D M Q T I T L K S -E L N
uvig_466516_CDS_0041 5 AcrIF19 0.78 View Alignment uvig_466516_CDS_0041 M N S G D L R T P S L F M R K F R K E R D M N F K D A F K A M K K G R M V -K R -P S ----W --G G Y W Y -W D A E (60)
M M S
AcrIF19 M K -----P L -H T M ------N Y -----------D N N Q M S L V Y E S Y D E Y G F E Y S V K L K -I S V
uvig_466516_CDS_0041 K K --T I M I Q C -R T K D N G -E K G D L L D I -R E --------T Q M V E Y T M -S S I -L S -D -D -W M I (120)
+ I E D L + M+ S + D
AcrIF19 R D Y R G I -D V S A F -N A F -P E W E D T L R M R D R V M S V E E I E N A M I S R Y -K S L -F I A P -P D C T Y E
uvig_466516_CDS_0041 V -E (123)
AcrIF19 F D I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;